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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=22)
GPGPGPRGQGVMGFGPGPGPCC

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4gyx-a1-m1-cB 22 22 1.0000 1.0000 1.0000 7.35e-08 4gyx-a1-m1-cA_4gyx-a1-m1-cB
2 4gyx-a1-m1-cA 22 22 1.0000 1.0000 1.0000 7.35e-08 4gyx-a1-m1-cA_4gyx-a1-m1-cB
3 2v53-a1-m1-cD 26 17 0.7273 0.6154 0.9412 0.095 2v53-a1-m1-cB_2v53-a1-m1-cD, 2v53-a1-m1-cC_2v53-a1-m1-cD
4 2v53-a1-m1-cC 26 17 0.7273 0.6154 0.9412 0.095 2v53-a1-m1-cC_2v53-a1-m1-cD
5 2v53-a1-m1-cB 26 17 0.7273 0.6154 0.9412 0.095 2v53-a1-m1-cB_2v53-a1-m1-cD
6 6los-a1-m2-cG 21 21 0.6818 0.7143 0.7143 0.95 6los-a1-m2-cH_6los-a1-m2-cG
7 5h64-a1-m1-ca 2101 12 0.3636 0.0038 0.6667 1.1 5h64-a1-m1-cA_5h64-a1-m1-ca
8 5h64-a1-m1-cA 2101 12 0.3636 0.0038 0.6667 1.1 5h64-a1-m1-cA_5h64-a1-m1-ca
9 1q7s-a3-m1-cB 114 15 0.3636 0.0702 0.5333 5.3 1q7s-a3-m1-cB_1q7s-a3-m1-cA
10 4dmt-a1-m1-cC 22 10 0.4545 0.4545 1.0000 5.4 4dmt-a1-m1-cA_4dmt-a1-m1-cC, 4dmt-a1-m1-cB_4dmt-a1-m1-cC
11 4dmt-a1-m1-cB 22 10 0.4545 0.4545 1.0000 5.4 4dmt-a1-m1-cA_4dmt-a1-m1-cB, 4dmt-a1-m1-cB_4dmt-a1-m1-cC
12 4dmt-a1-m1-cA 22 10 0.4545 0.4545 1.0000 5.4 4dmt-a1-m1-cA_4dmt-a1-m1-cB, 4dmt-a1-m1-cA_4dmt-a1-m1-cC
13 1fbl-a1-m2-cA 367 18 0.4091 0.0245 0.5000 8.5 1fbl-a1-m1-cA_1fbl-a1-m2-cA
14 1fbl-a1-m1-cA 367 18 0.4091 0.0245 0.5000 8.5 1fbl-a1-m1-cA_1fbl-a1-m2-cA
15 3hr2-a1-m9-cC 939 15 0.5909 0.0138 0.8667 9.0 3hr2-a1-m9-cA_3hr2-a1-m9-cC
16 3hr2-a1-m9-cA 939 15 0.5909 0.0138 0.8667 9.0 3hr2-a1-m9-cA_3hr2-a1-m9-cC
17 3hqv-a1-m9-cA 939 15 0.5909 0.0138 0.8667 9.0 3hqv-a1-m8-cC_3hqv-a1-m9-cA
18 3hqv-a1-m8-cC 939 15 0.5909 0.0138 0.8667 9.0 3hqv-a1-m8-cC_3hqv-a1-m9-cA
19 3hqv-a1-m3-cA 939 15 0.5909 0.0138 0.8667 9.0 3hqv-a1-m1-cA_3hqv-a1-m3-cA
20 3hqv-a1-m1-cA 939 15 0.5909 0.0138 0.8667 9.0 3hqv-a1-m1-cA_3hqv-a1-m3-cA
21 6los-a1-m2-cH 19 19 0.5909 0.6842 0.6842 9.9 6los-a1-m2-cH_6los-a1-m2-cG

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Reference:
Jacob Schwartz et al.

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