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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
GPGSYAPLDTELSEIEGLQDDDLAALLGKEFIREGGGSGGGSGGGSMNKPTSSDGWKDDY
LSRLSRLSKNQLMALALKLKQQQLEQG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6tdn-a1-m1-cB 87 87 1.0000 1.0000 1.0000 1.70e-56 6tdn-a1-m1-cA_6tdn-a1-m1-cB
2 6tdn-a1-m1-cA 87 87 1.0000 1.0000 1.0000 1.70e-56 6tdn-a1-m1-cA_6tdn-a1-m1-cB
3 6tdd-a1-m1-cB 45 45 0.5057 0.9778 0.9778 8.84e-25 6tdd-a1-m1-cA_6tdd-a1-m1-cB
4 6tdd-a1-m1-cA 45 45 0.5057 0.9778 0.9778 8.84e-25 6tdd-a1-m1-cA_6tdd-a1-m1-cB
5 6zdu-a1-m1-cB 693 32 0.1379 0.0173 0.3750 0.40 6zdu-a1-m1-cA_6zdu-a1-m1-cB
6 6zdu-a1-m1-cA 693 32 0.1379 0.0173 0.3750 0.40 6zdu-a1-m1-cA_6zdu-a1-m1-cB
7 6ecf-a1-m1-cA 250 39 0.1724 0.0600 0.3846 1.4 6ecf-a1-m1-cG_6ecf-a1-m1-cA
8 1hr8-a5-m2-cC 448 43 0.1609 0.0312 0.3256 5.5 1hr8-a5-m1-cE_1hr8-a5-m2-cC, 1hr8-a5-m1-cG_1hr8-a5-m2-cC
9 1hr8-a5-m1-cG 448 43 0.1609 0.0312 0.3256 5.7 1hr8-a5-m1-cG_1hr8-a5-m2-cC
10 1hr8-a5-m1-cE 445 43 0.1609 0.0315 0.3256 6.7 1hr8-a5-m1-cE_1hr8-a5-m2-cC

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Reference:
Jacob Schwartz et al.

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