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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=38)
GPHMADLLLNSTQFVQAFTYLIQNDKEFANKLHKAYLN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2wx4-a1-m1-cC 43 38 1.0000 0.8837 1.0000 7.98e-23 2wx4-a1-m1-cA_2wx4-a1-m1-cC
2 2wx4-a2-m1-cD 45 38 1.0000 0.8444 1.0000 8.14e-23 2wx4-a2-m1-cE_2wx4-a2-m1-cD
3 2wx4-a1-m1-cA 38 38 1.0000 1.0000 1.0000 9.23e-23 2wx4-a1-m1-cA_2wx4-a1-m1-cC
4 2wx4-a2-m1-cF 45 37 0.9737 0.8222 1.0000 1.02e-21 2wx4-a2-m1-cE_2wx4-a2-m1-cF
5 2wx4-a2-m1-cE 43 36 0.9474 0.8372 1.0000 1.45e-20 2wx4-a2-m1-cE_2wx4-a2-m1-cD, 2wx4-a2-m1-cE_2wx4-a2-m1-cF
6 4g09-a1-m2-cA 432 31 0.2895 0.0255 0.3548 8.4 4g09-a1-m1-cA_4g09-a1-m2-cA
7 4g09-a1-m1-cA 432 31 0.2895 0.0255 0.3548 8.4 4g09-a1-m1-cA_4g09-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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