Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=45)
GPHMADLLLNSTQFVQAFTYLIQNDKEFANKLHKAYLNGCSNLLL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2wx4-a2-m1-cD 45 45 1.0000 1.0000 1.0000 5.17e-28 2wx4-a2-m1-cE_2wx4-a2-m1-cD
2 2wx4-a2-m1-cF 45 44 0.9778 0.9778 1.0000 5.25e-27 2wx4-a2-m1-cE_2wx4-a2-m1-cF
3 2wx4-a1-m1-cC 43 43 0.9556 1.0000 1.0000 6.07e-27 2wx4-a1-m1-cA_2wx4-a1-m1-cC
4 2wx4-a2-m1-cE 43 43 0.9556 1.0000 1.0000 7.86e-26 2wx4-a2-m1-cE_2wx4-a2-m1-cD, 2wx4-a2-m1-cE_2wx4-a2-m1-cF
5 2wx4-a1-m1-cA 38 38 0.8444 1.0000 1.0000 9.64e-23 2wx4-a1-m1-cA_2wx4-a1-m1-cC
6 1d8i-a2-m1-cC 288 36 0.2444 0.0382 0.3056 7.2 1d8i-a2-m1-cB_1d8i-a2-m1-cC
7 1d8i-a2-m1-cB 288 36 0.2444 0.0382 0.3056 7.2 1d8i-a2-m1-cB_1d8i-a2-m1-cC
8 2b1g-a2-m1-cD 590 31 0.2444 0.0186 0.3548 8.8 2b1g-a2-m1-cC_2b1g-a2-m1-cD
9 2b1g-a2-m1-cC 590 31 0.2444 0.0186 0.3548 8.8 2b1g-a2-m1-cC_2b1g-a2-m1-cD
10 1pl0-a2-m1-cD 579 31 0.2222 0.0173 0.3226 9.6 1pl0-a2-m1-cD_1pl0-a2-m1-cC
11 1pl0-a2-m1-cC 585 31 0.2222 0.0171 0.3226 9.6 1pl0-a2-m1-cD_1pl0-a2-m1-cC
12 3qfg-a1-m1-cB 140 29 0.2222 0.0714 0.3448 9.7 3qfg-a1-m1-cB_3qfg-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600