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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=45)
GPHMADLLLNSTQFVQAFTYLIQNDKEFANKLHKAYLNGCSNLLL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2wx4-a2-m1-cD 45 45 1.0000 1.0000 1.0000 5.17e-28 2wx4-a2-m1-cE_2wx4-a2-m1-cD
2 2wx4-a2-m1-cF 45 44 0.9778 0.9778 1.0000 5.25e-27 2wx4-a2-m1-cE_2wx4-a2-m1-cF
3 2wx4-a1-m1-cC 43 43 0.9556 1.0000 1.0000 6.07e-27 2wx4-a1-m1-cA_2wx4-a1-m1-cC
4 2wx4-a2-m1-cE 43 43 0.9556 1.0000 1.0000 7.86e-26 2wx4-a2-m1-cE_2wx4-a2-m1-cD, 2wx4-a2-m1-cE_2wx4-a2-m1-cF
5 2wx4-a1-m1-cA 38 38 0.8444 1.0000 1.0000 9.64e-23 2wx4-a1-m1-cA_2wx4-a1-m1-cC
6 1d8i-a2-m1-cC 288 36 0.2444 0.0382 0.3056 7.2 1d8i-a2-m1-cB_1d8i-a2-m1-cC
7 1d8i-a2-m1-cB 288 36 0.2444 0.0382 0.3056 7.2 1d8i-a2-m1-cB_1d8i-a2-m1-cC
8 2b1g-a2-m1-cD 590 31 0.2444 0.0186 0.3548 8.8 2b1g-a2-m1-cC_2b1g-a2-m1-cD
9 2b1g-a2-m1-cC 590 31 0.2444 0.0186 0.3548 8.8 2b1g-a2-m1-cC_2b1g-a2-m1-cD
10 1pl0-a2-m1-cD 579 31 0.2222 0.0173 0.3226 9.6 1pl0-a2-m1-cD_1pl0-a2-m1-cC
11 1pl0-a2-m1-cC 585 31 0.2222 0.0171 0.3226 9.6 1pl0-a2-m1-cD_1pl0-a2-m1-cC
12 3qfg-a1-m1-cB 140 29 0.2222 0.0714 0.3448 9.7 3qfg-a1-m1-cB_3qfg-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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