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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=30)
GPHMLDNFMKQLLKLEESLNKLELEQKVTN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5jge-a2-m1-cE 30 30 1.0000 1.0000 1.0000 4.28e-15 5jge-a2-m1-cD_5jge-a2-m1-cE
2 5jge-a2-m1-cD 30 30 1.0000 1.0000 1.0000 4.28e-15 5jge-a2-m1-cD_5jge-a2-m1-cE
3 4xai-a1-m1-cB 565 21 0.2667 0.0142 0.3810 3.3 4xai-a1-m1-cA_4xai-a1-m1-cB
4 4xai-a1-m1-cA 565 21 0.2667 0.0142 0.3810 3.3 4xai-a1-m1-cA_4xai-a1-m1-cB
5 5z1f-a1-m1-cB 601 24 0.4000 0.0200 0.5000 5.0 5z1f-a1-m1-cA_5z1f-a1-m1-cB
6 5z1f-a1-m1-cA 601 24 0.4000 0.0200 0.5000 5.0 5z1f-a1-m1-cA_5z1f-a1-m1-cB
7 4hwg-a1-m6-cA 371 26 0.4000 0.0323 0.4615 9.8 4hwg-a1-m2-cA_4hwg-a1-m6-cA, 4hwg-a1-m5-cA_4hwg-a1-m6-cA
8 4hwg-a1-m5-cA 371 26 0.4000 0.0323 0.4615 9.8 4hwg-a1-m5-cA_4hwg-a1-m6-cA
9 4hwg-a1-m2-cA 371 26 0.4000 0.0323 0.4615 9.8 4hwg-a1-m2-cA_4hwg-a1-m6-cA

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Reference:
Jacob Schwartz et al.

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