Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
GPHMRTISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEEYNSLEETAYLLRS
PANARRLMDSIDSLKSGKGTEKDIIE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2a6q-a3-m1-cC 86 86 1.0000 1.0000 1.0000 5.06e-60 2a6q-a3-m1-cD_2a6q-a3-m1-cC
2 2a6q-a3-m1-cA 86 86 1.0000 1.0000 1.0000 5.06e-60 2a6q-a3-m1-cD_2a6q-a3-m1-cA
3 2a6q-a3-m1-cD 58 58 0.6744 1.0000 1.0000 3.08e-38 2a6q-a3-m1-cB_2a6q-a3-m1-cD, 2a6q-a3-m1-cD_2a6q-a3-m1-cA, 2a6q-a3-m1-cD_2a6q-a3-m1-cC
4 2a6q-a3-m1-cB 58 58 0.6744 1.0000 1.0000 3.08e-38 2a6q-a3-m1-cB_2a6q-a3-m1-cD
5 3cto-a7-m1-cB 83 72 0.4186 0.4337 0.5000 1.61e-17 3cto-a7-m1-cA_3cto-a7-m1-cB
6 3cto-a6-m1-cB 83 72 0.4186 0.4337 0.5000 1.61e-17 3cto-a6-m5-cA_3cto-a6-m1-cB
7 3d55-a4-m2-cB 84 72 0.4186 0.4286 0.5000 1.64e-17 3d55-a4-m2-cB_3d55-a4-m1-cC
8 3oei-a3-m1-cJ 86 72 0.4186 0.4186 0.5000 1.74e-17 3oei-a3-m1-cI_3oei-a3-m1-cJ
9 3d55-a4-m1-cC 86 72 0.4186 0.4186 0.5000 2.10e-17 3d55-a4-m1-cA_3d55-a4-m1-cC, 3d55-a4-m2-cB_3d55-a4-m1-cC
10 3cto-a5-m5-cC 86 72 0.4186 0.4186 0.5000 2.10e-17 3cto-a5-m1-cD_3cto-a5-m5-cC
11 3cto-a7-m1-cD 65 66 0.3953 0.5231 0.5152 1.00e-16 3cto-a7-m1-cD_3cto-a7-m1-cA
12 3cto-a5-m1-cD 65 66 0.3953 0.5231 0.5152 1.00e-16 3cto-a5-m1-cD_3cto-a5-m5-cC
13 3oei-a3-m1-cI 83 66 0.3953 0.4096 0.5152 1.04e-16 3oei-a3-m1-cI_3oei-a3-m1-cJ
14 3d55-a4-m1-cA 68 66 0.3953 0.5000 0.5152 1.23e-16 3d55-a4-m1-cA_3d55-a4-m1-cC
15 3cto-a7-m1-cA 68 66 0.3953 0.5000 0.5152 1.23e-16 3cto-a7-m1-cA_3cto-a7-m1-cB, 3cto-a7-m1-cD_3cto-a7-m1-cA
16 3cto-a6-m5-cA 68 66 0.3953 0.5000 0.5152 1.23e-16 3cto-a6-m5-cA_3cto-a6-m1-cB
17 6l8e-a1-m1-cA 83 77 0.3953 0.4096 0.4416 6.98e-15 6l8e-a1-m1-cB_6l8e-a1-m1-cA
18 6l8e-a2-m1-cJ 59 54 0.2674 0.3898 0.4259 7.13e-09 6l8e-a2-m1-cL_6l8e-a2-m1-cJ
19 6l8e-a1-m1-cB 54 50 0.2558 0.4074 0.4400 8.88e-08 6l8e-a1-m1-cB_6l8e-a1-m1-cA
20 6l8e-a2-m1-cL 57 50 0.2558 0.3860 0.4400 1.01e-07 6l8e-a2-m1-cL_6l8e-a2-m1-cJ
21 7v6w-a2-m1-cI 56 55 0.2209 0.3393 0.3455 1.15e-04 7v6w-a2-m1-cI_7v6w-a2-m1-cJ, 7v6w-a2-m1-cI_7v6w-a2-m1-cK
22 7v6w-a2-m1-cJ 85 55 0.2209 0.2235 0.3455 1.23e-04 7v6w-a2-m1-cI_7v6w-a2-m1-cJ
23 7v6w-a2-m1-cK 58 55 0.2209 0.3276 0.3455 1.31e-04 7v6w-a2-m1-cI_7v6w-a2-m1-cK
24 3g5o-a1-m1-cD 92 82 0.2558 0.2391 0.2683 0.002 3g5o-a1-m1-cA_3g5o-a1-m1-cD
25 3g5o-a1-m1-cA 92 82 0.2558 0.2391 0.2683 0.002 3g5o-a1-m1-cA_3g5o-a1-m1-cD
26 4g5h-a1-m6-cA 346 56 0.2093 0.0520 0.3214 2.0 4g5h-a1-m3-cA_4g5h-a1-m6-cA, 4g5h-a1-m5-cA_4g5h-a1-m6-cA
27 4g5h-a1-m5-cA 346 56 0.2093 0.0520 0.3214 2.0 4g5h-a1-m5-cA_4g5h-a1-m6-cA
28 4g5h-a1-m3-cA 346 56 0.2093 0.0520 0.3214 2.0 4g5h-a1-m3-cA_4g5h-a1-m6-cA
29 3w1v-a1-m3-cB 346 56 0.2093 0.0520 0.3214 2.0 3w1v-a1-m3-cB_3w1v-a1-m2-cA
30 3w1v-a1-m2-cA 347 56 0.2093 0.0519 0.3214 2.1 3w1v-a1-m3-cB_3w1v-a1-m2-cA
31 7cfu-a2-m2-cR 175 27 0.1163 0.0571 0.3704 3.2 7cfu-a2-m2-cQ_7cfu-a2-m2-cR
32 7cfu-a2-m2-cQ 175 27 0.1163 0.0571 0.3704 3.2 7cfu-a2-m1-cJ_7cfu-a2-m2-cQ, 7cfu-a2-m2-cQ_7cfu-a2-m2-cR
33 7cfu-a2-m1-cJ 175 27 0.1163 0.0571 0.3704 3.2 7cfu-a2-m1-cJ_7cfu-a2-m2-cQ
34 7cfu-a1-m1-cU 175 27 0.1163 0.0571 0.3704 3.2 7cfu-a1-m1-cD_7cfu-a1-m1-cU
35 7cfu-a1-m1-cD 175 27 0.1163 0.0571 0.3704 3.2 7cfu-a1-m1-cD_7cfu-a1-m1-cU
36 5xfw-a2-m1-cC 312 31 0.1279 0.0353 0.3548 5.8 5xfw-a2-m1-cC_5xfw-a2-m1-cD
37 5xfw-a2-m1-cD 315 31 0.1279 0.0349 0.3548 5.9 5xfw-a2-m1-cC_5xfw-a2-m1-cD
38 2qcv-a1-m4-cA 320 30 0.1628 0.0437 0.4667 9.1 2qcv-a1-m1-cA_2qcv-a1-m4-cA, 2qcv-a1-m3-cA_2qcv-a1-m4-cA
39 2qcv-a1-m3-cA 320 30 0.1628 0.0437 0.4667 9.1 2qcv-a1-m3-cA_2qcv-a1-m4-cA
40 2qcv-a1-m1-cA 320 30 0.1628 0.0437 0.4667 9.1 2qcv-a1-m1-cA_2qcv-a1-m4-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600