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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
GPLGDGAVTLQEYLELKKALATSEAKVQQLMKVNSSLSDELRKLQREIHKLQAENLQLRQ
P

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2w6a-a1-m1-cA 61 61 1.0000 1.0000 1.0000 3.49e-38 2w6a-a1-m1-cB_2w6a-a1-m1-cA
2 2w6a-a1-m1-cB 56 56 0.9180 1.0000 1.0000 1.85e-33 2w6a-a1-m1-cB_2w6a-a1-m1-cA
3 3s9g-a1-m1-cA 82 49 0.3279 0.2439 0.4082 0.003 3s9g-a1-m1-cB_3s9g-a1-m1-cA
4 3s9g-a1-m1-cB 76 49 0.3279 0.2632 0.4082 0.003 3s9g-a1-m1-cB_3s9g-a1-m1-cA
5 2gd7-a1-m1-cB 107 52 0.3279 0.1869 0.3846 0.044 2gd7-a1-m1-cA_2gd7-a1-m1-cB
6 2gd7-a1-m1-cA 107 52 0.3279 0.1869 0.3846 0.044 2gd7-a1-m1-cA_2gd7-a1-m1-cB
7 5cc8-a1-m1-cB 296 45 0.2623 0.0541 0.3556 0.25 5cc8-a1-m1-cA_5cc8-a1-m1-cB
8 5cc8-a1-m1-cA 296 45 0.2623 0.0541 0.3556 0.25 5cc8-a1-m1-cA_5cc8-a1-m1-cB
9 4r4m-a2-m2-cC 49 48 0.2623 0.3265 0.3333 0.52 4r4m-a2-m1-cC_4r4m-a2-m2-cC
10 4r4m-a2-m1-cC 49 48 0.2623 0.3265 0.3333 0.52 4r4m-a2-m1-cC_4r4m-a2-m2-cC
11 1osc-a3-m1-cF 111 35 0.1803 0.0991 0.3143 8.2 1osc-a3-m1-cB_1osc-a3-m1-cF
12 3quw-a1-m3-cA 125 51 0.2295 0.1120 0.2745 9.7 3quw-a1-m2-cA_3quw-a1-m3-cA
13 3quw-a1-m2-cA 125 51 0.2295 0.1120 0.2745 9.7 3quw-a1-m2-cA_3quw-a1-m3-cA

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Reference:
Jacob Schwartz et al.

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