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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
GPLGSDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVNTSK
YAESYRIQTYAEYMG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ctr-a2-m4-cA 75 75 1.0000 1.0000 1.0000 1.94e-52 3ctr-a2-m1-cA_3ctr-a2-m4-cA, 3ctr-a2-m2-cA_3ctr-a2-m4-cA, 3ctr-a2-m3-cA_3ctr-a2-m4-cA
2 3ctr-a2-m3-cA 75 75 1.0000 1.0000 1.0000 1.94e-52 3ctr-a2-m3-cA_3ctr-a2-m4-cA
3 3ctr-a2-m2-cA 75 75 1.0000 1.0000 1.0000 1.94e-52 3ctr-a2-m2-cA_3ctr-a2-m4-cA
4 3ctr-a2-m1-cA 75 75 1.0000 1.0000 1.0000 1.94e-52 3ctr-a2-m1-cA_3ctr-a2-m4-cA
5 6nx5-a2-m1-cC 74 34 0.1733 0.1757 0.3824 0.052 6nx5-a2-m1-cC_6nx5-a2-m1-cD
6 6nx5-a2-m1-cD 75 36 0.1867 0.1867 0.3889 0.23 6nx5-a2-m1-cC_6nx5-a2-m1-cD
7 5joq-a1-m3-cA 258 43 0.1867 0.0543 0.3256 1.7 5joq-a1-m2-cA_5joq-a1-m3-cA
8 5joq-a1-m2-cA 258 43 0.1867 0.0543 0.3256 1.7 5joq-a1-m2-cA_5joq-a1-m3-cA
9 3nnc-a2-m4-cA 175 29 0.1333 0.0571 0.3448 5.7 3nnc-a2-m2-cA_3nnc-a2-m4-cA, 3nnc-a2-m3-cA_3nnc-a2-m4-cA
10 3nnc-a2-m3-cA 175 29 0.1333 0.0571 0.3448 5.7 3nnc-a2-m3-cA_3nnc-a2-m4-cA
11 3nnc-a2-m2-cA 175 29 0.1333 0.0571 0.3448 5.7 3nnc-a2-m2-cA_3nnc-a2-m4-cA
12 2p8u-a1-m1-cB 461 24 0.1467 0.0239 0.4583 6.8 2p8u-a1-m1-cA_2p8u-a1-m1-cB
13 2p8u-a1-m1-cA 461 24 0.1467 0.0239 0.4583 6.8 2p8u-a1-m1-cA_2p8u-a1-m1-cB
14 3b2d-a1-m1-cB 601 35 0.1733 0.0216 0.3714 9.0 3b2d-a1-m1-cA_3b2d-a1-m1-cB
15 3b2d-a1-m1-cA 601 35 0.1733 0.0216 0.3714 9.0 3b2d-a1-m1-cA_3b2d-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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