Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=99)
GPLGSDQYIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVE
CGSMNDAKKIIKSFHGKRLDLKHRLFLYTMKDVERYNSD

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 3ns6-a3-m1-cB 99 99 1.0000 1.0000 1.0000 6.58e-70 3ns6-a3-m1-cA_3ns6-a3-m1-cB
2 3ns6-a3-m1-cA 99 99 1.0000 1.0000 1.0000 6.58e-70 3ns6-a3-m1-cA_3ns6-a3-m1-cB
3 6r5k-a1-m1-cF 165 55 0.2020 0.1212 0.3636 0.081 6r5k-a1-m1-cF_6r5k-a1-m1-cH
4 7odz-a1-m1-cB 307 75 0.2424 0.0782 0.3200 0.13 7odz-a1-m1-cA_7odz-a1-m1-cB
5 7odz-a1-m1-cA 307 75 0.2424 0.0782 0.3200 0.13 7odz-a1-m1-cA_7odz-a1-m1-cB
6 6r5k-a1-m1-cD 390 54 0.2020 0.0513 0.3704 0.14 6r5k-a1-m1-cD_6r5k-a1-m1-cH
7 6r5k-a1-m1-cH 394 54 0.2020 0.0508 0.3704 0.14 6r5k-a1-m1-cD_6r5k-a1-m1-cH, 6r5k-a1-m1-cF_6r5k-a1-m1-cH
8 6dcl-a1-m1-cA 182 48 0.1616 0.0879 0.3333 0.18 6dcl-a1-m1-cB_6dcl-a1-m1-cA
9 3md1-a4-m5-cB 79 60 0.1616 0.2025 0.2667 0.24 3md1-a4-m4-cB_3md1-a4-m5-cB
10 3md1-a4-m4-cB 79 60 0.1616 0.2025 0.2667 0.24 3md1-a4-m4-cB_3md1-a4-m5-cB
11 1hh2-a1-m2-cP 344 90 0.2929 0.0843 0.3222 0.33 1hh2-a1-m1-cP_1hh2-a1-m2-cP
12 1hh2-a1-m1-cP 344 90 0.2929 0.0843 0.3222 0.33 1hh2-a1-m1-cP_1hh2-a1-m2-cP
13 3bs9-a3-m1-cB 79 43 0.1515 0.1899 0.3488 0.38 3bs9-a3-m1-cA_3bs9-a3-m1-cB
14 3bs9-a3-m1-cA 79 43 0.1515 0.1899 0.3488 0.38 3bs9-a3-m1-cA_3bs9-a3-m1-cB
15 3md3-a2-m2-cA 165 34 0.1212 0.0727 0.3529 0.49 3md3-a2-m1-cA_3md3-a2-m2-cA
16 3md3-a2-m2-cA 165 58 0.1414 0.0848 0.2414 2.0 3md3-a2-m1-cA_3md3-a2-m2-cA
17 3md3-a2-m1-cA 165 34 0.1212 0.0727 0.3529 0.49 3md3-a2-m1-cA_3md3-a2-m2-cA
18 3md3-a2-m1-cA 165 58 0.1414 0.0848 0.2414 2.0 3md3-a2-m1-cA_3md3-a2-m2-cA
19 7wm3-a2-m1-cD 179 43 0.1414 0.0782 0.3256 0.75 7wm3-a2-m1-cB_7wm3-a2-m1-cD
20 7wm3-a2-m1-cB 179 43 0.1414 0.0782 0.3256 0.75 7wm3-a2-m1-cB_7wm3-a2-m1-cD
21 5whs-a1-m1-cB 712 31 0.1313 0.0183 0.4194 0.91 5whs-a1-m1-cA_5whs-a1-m1-cB
22 5whs-a1-m1-cA 712 31 0.1313 0.0183 0.4194 0.91 5whs-a1-m1-cA_5whs-a1-m1-cB
23 5kw6-a1-m1-cA 201 47 0.1313 0.0647 0.2766 1.5 5kw6-a1-m1-cB_5kw6-a1-m1-cA
24 6r6t-a1-m1-cB 451 43 0.1313 0.0288 0.3023 1.6 6r6t-a1-m1-cA_6r6t-a1-m1-cB
25 6r6t-a1-m1-cA 450 43 0.1313 0.0289 0.3023 1.6 6r6t-a1-m1-cA_6r6t-a1-m1-cB
26 5kw6-a1-m1-cB 198 47 0.1313 0.0657 0.2766 1.6 5kw6-a1-m1-cB_5kw6-a1-m1-cA
27 4puh-a1-m1-cB 81 32 0.1010 0.1235 0.3125 2.3 4puh-a1-m1-cA_4puh-a1-m1-cB
28 4puh-a1-m1-cA 81 32 0.1010 0.1235 0.3125 2.3 4puh-a1-m1-cA_4puh-a1-m1-cB
29 4lgo-a1-m1-cB 116 47 0.1818 0.1552 0.3830 2.4 4lgo-a1-m1-cB_4lgo-a1-m1-cC
30 4lgo-a1-m1-cC 117 47 0.1818 0.1538 0.3830 2.4 4lgo-a1-m1-cB_4lgo-a1-m1-cC
31 5ju6-a1-m1-cD 835 57 0.1717 0.0204 0.2982 3.8 5ju6-a1-m1-cA_5ju6-a1-m1-cD, 5ju6-a1-m1-cC_5ju6-a1-m1-cD
32 5ju6-a1-m1-cC 835 57 0.1717 0.0204 0.2982 3.8 5ju6-a1-m1-cA_5ju6-a1-m1-cC, 5ju6-a1-m1-cC_5ju6-a1-m1-cD
33 5ju6-a1-m1-cA 835 57 0.1717 0.0204 0.2982 3.8 5ju6-a1-m1-cA_5ju6-a1-m1-cC, 5ju6-a1-m1-cA_5ju6-a1-m1-cD
34 3val-a1-m1-cA 174 39 0.1414 0.0805 0.3590 4.9 3val-a1-m1-cI_3val-a1-m1-cA
35 3vai-a1-m1-cB 174 39 0.1414 0.0805 0.3590 4.9 3vai-a1-m1-cA_3vai-a1-m1-cB
36 3vai-a1-m1-cA 174 39 0.1414 0.0805 0.3590 4.9 3vai-a1-m1-cA_3vai-a1-m1-cB
37 4a5m-a3-m1-cF 97 53 0.1616 0.1649 0.3019 4.9 4a5m-a3-m1-cE_4a5m-a3-m1-cF
38 3val-a1-m1-cI 172 39 0.1414 0.0814 0.3590 5.1 3val-a1-m1-cI_3val-a1-m1-cA
39 2g4b-a1-m2-cA 172 39 0.1414 0.0814 0.3590 5.1 2g4b-a1-m1-cA_2g4b-a1-m2-cA
40 2g4b-a1-m1-cA 172 39 0.1414 0.0814 0.3590 5.1 2g4b-a1-m1-cA_2g4b-a1-m2-cA
41 4a5m-a3-m1-cE 96 53 0.1616 0.1667 0.3019 5.3 4a5m-a3-m1-cE_4a5m-a3-m1-cF

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600