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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
GPLGSEQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRVL
ELIPQIANEQLTEELLIVNDNLNNVFLRHERFERFRTG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1wrd-a2-m9-cA 98 98 1.0000 1.0000 1.0000 4.27e-66 1wrd-a2-m24-cA_1wrd-a2-m9-cA, 1wrd-a2-m7-cA_1wrd-a2-m9-cA
2 1wrd-a2-m7-cA 98 98 1.0000 1.0000 1.0000 4.27e-66 1wrd-a2-m7-cA_1wrd-a2-m9-cA
3 1wrd-a2-m24-cA 98 98 1.0000 1.0000 1.0000 4.27e-66 1wrd-a2-m24-cA_1wrd-a2-m9-cA
4 3rty-a4-m1-cG 306 62 0.1633 0.0523 0.2581 0.25 3rty-a4-m1-cH_3rty-a4-m1-cG
5 3r6y-a2-m1-cG 384 63 0.1939 0.0495 0.3016 0.74 3r6y-a2-m1-cG_3r6y-a2-m1-cF
6 3r6y-a2-m1-cF 390 63 0.1939 0.0487 0.3016 0.78 3r6y-a2-m1-cG_3r6y-a2-m1-cF
7 3r6q-a2-m1-cF 463 63 0.1939 0.0410 0.3016 0.87 3r6q-a2-m1-cH_3r6q-a2-m1-cF
8 3r6q-a2-m1-cH 462 63 0.1939 0.0411 0.3016 0.88 3r6q-a2-m1-cG_3r6q-a2-m1-cH, 3r6q-a2-m1-cH_3r6q-a2-m1-cF
9 3r6q-a2-m1-cG 462 63 0.1939 0.0411 0.3016 0.88 3r6q-a2-m1-cG_3r6q-a2-m1-cH
10 3rty-a4-m1-cH 302 46 0.1429 0.0464 0.3043 1.0 3rty-a4-m1-cH_3rty-a4-m1-cG
11 7kgy-a1-m4-cC 591 84 0.2041 0.0338 0.2381 1.1 7kgy-a1-m2-cB_7kgy-a1-m4-cC, 7kgy-a1-m4-cC_7kgy-a1-m1-cA, 7kgy-a1-m4-cC_7kgy-a1-m3-cD
12 7kgy-a1-m2-cB 591 84 0.2041 0.0338 0.2381 1.1 7kgy-a1-m2-cB_7kgy-a1-m4-cC
13 7kgy-a1-m3-cD 592 84 0.2041 0.0338 0.2381 1.1 7kgy-a1-m4-cC_7kgy-a1-m3-cD
14 7kgy-a1-m1-cA 593 84 0.2041 0.0337 0.2381 1.1 7kgy-a1-m4-cC_7kgy-a1-m1-cA
15 6ut7-a1-m1-cN 414 54 0.1837 0.0435 0.3333 3.3 6ut7-a1-m1-cG_6ut7-a1-m1-cN
16 6ut7-a1-m1-cG 414 54 0.1837 0.0435 0.3333 3.3 6ut7-a1-m1-cG_6ut7-a1-m1-cN
17 4yf1-a1-m1-cA 155 48 0.1735 0.1097 0.3542 5.1 4yf1-a1-m1-cC_4yf1-a1-m1-cA
18 4yf1-a1-m1-cC 144 61 0.1939 0.1319 0.3115 5.5 4yf1-a1-m1-cC_4yf1-a1-m1-cA
19 3t60-a1-m1-cC 145 28 0.1122 0.0759 0.3929 6.8 3t60-a1-m1-cB_3t60-a1-m1-cC
20 6z2x-a1-m1-cF 2325 36 0.1327 0.0056 0.3611 8.6 6z2x-a1-m1-cE_6z2x-a1-m1-cF
21 6z2x-a1-m1-cE 2325 36 0.1327 0.0056 0.3611 8.6 6z2x-a1-m1-cE_6z2x-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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