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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
GPLGSGQCLYKISSYTSYPMHDFYRCHTCNDRNAICVNCIKKCHQGHDVEFIRHDRFFCD
CGAGTLSNPCTL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5vmd-a2-m1-cB 72 72 1.0000 1.0000 1.0000 3.24e-50 5vmd-a2-m1-cD_5vmd-a2-m1-cB
2 5vmd-a2-m1-cD 66 67 0.9167 1.0000 0.9851 1.21e-43 5vmd-a2-m1-cD_5vmd-a2-m1-cB
3 8e0q-a1-m1-cB 1689 44 0.2083 0.0089 0.3409 3.11e-04 8e0q-a1-m1-cA_8e0q-a1-m1-cB
4 8e0q-a1-m1-cA 1689 44 0.2083 0.0089 0.3409 3.11e-04 8e0q-a1-m1-cA_8e0q-a1-m1-cB
5 8ewi-a1-m1-cD 1775 44 0.2083 0.0085 0.3409 3.47e-04 8ewi-a1-m1-cB_8ewi-a1-m1-cD
6 8ewi-a1-m1-cB 1775 44 0.2083 0.0085 0.3409 3.47e-04 8ewi-a1-m1-cB_8ewi-a1-m1-cD
7 7xwf-a1-m2-cA 73 49 0.2778 0.2740 0.4082 0.18 7xwf-a1-m1-cA_7xwf-a1-m2-cA
8 7xwf-a1-m1-cA 73 49 0.2778 0.2740 0.4082 0.18 7xwf-a1-m1-cA_7xwf-a1-m2-cA
9 7xwd-a1-m2-cA 70 49 0.2778 0.2857 0.4082 0.19 7xwd-a1-m1-cA_7xwd-a1-m2-cA
10 7xwd-a1-m1-cA 70 49 0.2778 0.2857 0.4082 0.19 7xwd-a1-m1-cA_7xwd-a1-m2-cA
11 7xwg-a1-m1-cB 72 49 0.2778 0.2778 0.4082 0.19 7xwg-a1-m1-cA_7xwg-a1-m1-cB
12 7xwg-a1-m1-cA 72 49 0.2778 0.2778 0.4082 0.19 7xwg-a1-m1-cA_7xwg-a1-m1-cB
13 7xwe-a1-m1-cB 76 49 0.2778 0.2632 0.4082 0.23 7xwe-a1-m1-cA_7xwe-a1-m1-cB
14 7xwe-a1-m1-cA 76 49 0.2778 0.2632 0.4082 0.23 7xwe-a1-m1-cA_7xwe-a1-m1-cB
15 6kw5-a1-m1-cH 393 56 0.2083 0.0382 0.2679 3.8 6kw5-a1-m1-cD_6kw5-a1-m1-cH
16 7bvh-a1-m1-cB 1035 25 0.1528 0.0106 0.4400 8.4 7bvh-a1-m1-cA_7bvh-a1-m1-cB
17 7bvh-a1-m1-cA 1035 25 0.1528 0.0106 0.4400 8.4 7bvh-a1-m1-cA_7bvh-a1-m1-cB
18 1bcc-a1-m2-cB 406 26 0.1389 0.0246 0.3846 8.8 1bcc-a1-m1-cB_1bcc-a1-m2-cB
19 1bcc-a1-m1-cB 406 26 0.1389 0.0246 0.3846 8.8 1bcc-a1-m1-cB_1bcc-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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