Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=91)
GPLGSLVAIQAELTKSQETIGSLNEEIEQYKGTVSTLEIEREFYFNKLRDIEILVHTTQD
LINEGVYKGALLRFVKKVESILYATAEGFEM

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 4e61-a1-m1-cA 91 91 1.0000 1.0000 1.0000 2.16e-61 4e61-a1-m1-cB_4e61-a1-m1-cA
2 4e61-a1-m1-cB 84 86 0.9121 0.9881 0.9651 9.73e-53 4e61-a1-m1-cB_4e61-a1-m1-cA
3 5jvm-a1-m1-cA 82 77 0.3626 0.4024 0.4286 1.36e-09 5jvm-a1-m1-cB_5jvm-a1-m1-cA
4 5jvm-a1-m1-cB 79 77 0.3626 0.4177 0.4286 1.56e-09 5jvm-a1-m1-cB_5jvm-a1-m1-cA
5 5jvu-a1-m1-cA 76 59 0.3187 0.3816 0.4915 7.03e-09 5jvu-a1-m1-cB_5jvu-a1-m1-cA
6 6pf2-a1-m1-cA 157 76 0.3626 0.2102 0.4342 2.27e-08 6pf2-a1-m1-cB_6pf2-a1-m1-cA
7 5m9e-a2-m1-cC 68 71 0.2857 0.3824 0.3662 4.55e-08 5m9e-a2-m1-cC_5m9e-a2-m1-cD
8 5m9e-a2-m1-cD 70 71 0.2857 0.3714 0.3662 4.86e-08 5m9e-a2-m1-cC_5m9e-a2-m1-cD
9 5jv3-a2-m1-cD 68 66 0.3187 0.4265 0.4394 1.84e-07 5jv3-a2-m1-cC_5jv3-a2-m1-cD
10 5jvp-a2-m3-cB 88 55 0.2857 0.2955 0.4727 9.97e-07 5jvp-a2-m1-cB_5jvp-a2-m3-cB
11 5jvp-a2-m1-cB 88 55 0.2857 0.2955 0.4727 9.97e-07 5jvp-a2-m1-cB_5jvp-a2-m3-cB
12 5jvu-a1-m1-cB 69 55 0.2857 0.3768 0.4727 1.84e-06 5jvu-a1-m1-cB_5jvu-a1-m1-cA
13 6pf2-a1-m1-cB 150 74 0.3407 0.2067 0.4189 2.02e-06 6pf2-a1-m1-cB_6pf2-a1-m1-cA
14 5jv3-a2-m1-cC 64 64 0.2967 0.4219 0.4219 5.79e-06 5jv3-a2-m1-cC_5jv3-a2-m1-cD
15 6pfp-a2-m1-cD 156 74 0.3297 0.1923 0.4054 1.11e-05 6pfp-a2-m1-cC_6pfp-a2-m1-cD
16 6pfp-a2-m1-cC 156 74 0.3297 0.1923 0.4054 1.11e-05 6pfp-a2-m1-cC_6pfp-a2-m1-cD
17 3mtu-a2-m1-cA 72 52 0.2527 0.3194 0.4423 1.56e-05 3mtu-a2-m1-cB_3mtu-a2-m1-cA
18 4xa1-a1-m1-cB 155 62 0.2637 0.1548 0.3871 9.21e-05 4xa1-a1-m1-cA_4xa1-a1-m1-cB
19 4xa1-a1-m1-cA 153 60 0.2527 0.1503 0.3833 2.47e-04 4xa1-a1-m1-cA_4xa1-a1-m1-cB
20 3mtu-a2-m1-cD 64 50 0.2308 0.3281 0.4200 0.001 3mtu-a2-m1-cD_3mtu-a2-m1-cB
21 5jx1-a1-m2-cA 64 49 0.2088 0.2969 0.3878 0.003 5jx1-a1-m1-cA_5jx1-a1-m2-cA
22 5jx1-a1-m1-cA 64 49 0.2088 0.2969 0.3878 0.003 5jx1-a1-m1-cA_5jx1-a1-m2-cA
23 3mtu-a2-m1-cB 65 48 0.2198 0.3077 0.4167 0.003 3mtu-a2-m1-cB_3mtu-a2-m1-cA, 3mtu-a2-m1-cD_3mtu-a2-m1-cB
24 6yf5-a2-m1-cC 87 85 0.2967 0.3103 0.3176 0.009 6yf5-a2-m1-cD_6yf5-a2-m1-cC
25 6yf5-a2-m1-cD 82 85 0.2967 0.3293 0.3176 0.011 6yf5-a2-m1-cD_6yf5-a2-m1-cC
26 4xa3-a1-m1-cB 142 44 0.1538 0.0986 0.3182 0.11 4xa3-a1-m1-cA_4xa3-a1-m1-cB
27 4xa3-a1-m1-cA 142 44 0.1538 0.0986 0.3182 0.11 4xa3-a1-m1-cA_4xa3-a1-m1-cB
28 5da8-a1-m1-cI 512 83 0.2418 0.0430 0.2651 1.1 5da8-a1-m1-cC_5da8-a1-m1-cI
29 5da8-a1-m1-cN 511 83 0.2418 0.0431 0.2651 2.0 5da8-a1-m1-cM_5da8-a1-m1-cN
30 3ilv-a2-m2-cA 570 26 0.1429 0.0228 0.5000 2.2 3ilv-a2-m1-cA_3ilv-a2-m2-cA
31 3ilv-a2-m1-cA 570 26 0.1429 0.0228 0.5000 2.2 3ilv-a2-m1-cA_3ilv-a2-m2-cA
32 5da8-a1-m1-cM 463 69 0.1978 0.0389 0.2609 4.3 5da8-a1-m1-cM_5da8-a1-m1-cN
33 5da8-a1-m1-cJ 507 69 0.1978 0.0355 0.2609 4.5 5da8-a1-m1-cC_5da8-a1-m1-cJ
34 5da8-a1-m1-cC 478 69 0.1978 0.0377 0.2609 4.6 5da8-a1-m1-cC_5da8-a1-m1-cI, 5da8-a1-m1-cC_5da8-a1-m1-cJ
35 5da8-a1-m1-cK 433 69 0.1978 0.0416 0.2609 4.9 5da8-a1-m1-cK_5da8-a1-m1-cL
36 5da8-a1-m1-cL 484 69 0.1978 0.0372 0.2609 5.2 5da8-a1-m1-cK_5da8-a1-m1-cL

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600