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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
GPLKPEEHEDILNKLLDPELAQSERTEALQQLRVNYGSFVSEYNDLTKKMDADLSQLQTE
VEEAVQECRNAEEKAKKAITDAAMMAEELKKE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5wme-a1-m1-cB 92 92 1.0000 1.0000 1.0000 1.12e-62 5wme-a1-m1-cD_5wme-a1-m1-cB
2 5wme-a1-m1-cC 93 92 1.0000 0.9892 1.0000 1.35e-62 5wme-a1-m1-cD_5wme-a1-m1-cC
3 5wme-a1-m1-cA 91 91 0.9891 1.0000 1.0000 1.54e-61 5wme-a1-m1-cD_5wme-a1-m1-cA
4 5wme-a1-m1-cD 89 89 0.9674 1.0000 1.0000 8.30e-60 5wme-a1-m1-cD_5wme-a1-m1-cA, 5wme-a1-m1-cD_5wme-a1-m1-cB, 5wme-a1-m1-cD_5wme-a1-m1-cC
5 5wjb-a2-m1-cD 121 92 0.9565 0.7273 0.9565 5.52e-57 5wjb-a2-m1-cC_5wjb-a2-m1-cD
6 5wjb-a2-m1-cC 112 91 0.9457 0.7768 0.9560 3.57e-56 5wjb-a2-m1-cC_5wjb-a2-m1-cD
7 4iff-a2-m1-cD 81 76 0.6087 0.6914 0.7368 3.04e-32 4iff-a2-m1-cD_4iff-a2-m1-cC
8 4iff-a2-m1-cC 82 76 0.6087 0.6829 0.7368 3.13e-32 4iff-a2-m1-cD_4iff-a2-m1-cC
9 6pf2-a1-m1-cB 150 112 0.6522 0.4000 0.5357 3.71e-32 6pf2-a1-m1-cB_6pf2-a1-m1-cA
10 5wlq-a1-m2-cA 104 76 0.5978 0.5288 0.7237 4.28e-32 5wlq-a1-m1-cA_5wlq-a1-m2-cA
11 5wlq-a1-m1-cA 104 76 0.5978 0.5288 0.7237 4.28e-32 5wlq-a1-m1-cA_5wlq-a1-m2-cA
12 6pf2-a1-m1-cA 157 112 0.6522 0.3822 0.5357 4.92e-32 6pf2-a1-m1-cB_6pf2-a1-m1-cA
13 4xa3-a1-m1-cA 142 80 0.6196 0.4014 0.7125 1.76e-31 4xa3-a1-m1-cA_4xa3-a1-m1-cB
14 4xa3-a1-m1-cB 142 80 0.6196 0.4014 0.7125 1.80e-31 4xa3-a1-m1-cA_4xa3-a1-m1-cB
15 5cj1-a1-m1-cB 98 74 0.5870 0.5510 0.7297 1.90e-31 5cj1-a1-m1-cA_5cj1-a1-m1-cB
16 5cj1-a1-m1-cA 98 74 0.5870 0.5510 0.7297 1.90e-31 5cj1-a1-m1-cA_5cj1-a1-m1-cB
17 6pfp-a2-m1-cD 156 92 0.5978 0.3526 0.5978 1.86e-30 6pfp-a2-m1-cC_6pfp-a2-m1-cD
18 6pfp-a2-m1-cC 156 92 0.5978 0.3526 0.5978 1.86e-30 6pfp-a2-m1-cC_6pfp-a2-m1-cD
19 4xa1-a1-m1-cA 153 77 0.6196 0.3725 0.7403 2.08e-29 4xa1-a1-m1-cA_4xa1-a1-m1-cB
20 4xa1-a1-m1-cB 155 77 0.6196 0.3677 0.7403 2.15e-29 4xa1-a1-m1-cA_4xa1-a1-m1-cB
21 3oa7-a1-m2-cA 188 80 0.5870 0.2872 0.6750 3.58e-29 3oa7-a1-m1-cA_3oa7-a1-m2-cA
22 3oa7-a1-m1-cA 188 80 0.5870 0.2872 0.6750 3.58e-29 3oa7-a1-m1-cA_3oa7-a1-m2-cA
23 4xa6-a1-m1-cA 149 48 0.4783 0.2953 0.9167 1.25e-22 4xa6-a1-m1-cB_4xa6-a1-m1-cA
24 4xa6-a1-m1-cB 146 45 0.4565 0.2877 0.9333 1.29e-22 4xa6-a1-m1-cB_4xa6-a1-m1-cA
25 3mtu-a1-m1-cF 64 46 0.4348 0.6250 0.8696 6.91e-22 3mtu-a1-m1-cE_3mtu-a1-m1-cF
26 3mtu-a1-m1-cE 64 46 0.4348 0.6250 0.8696 6.91e-22 3mtu-a1-m1-cE_3mtu-a1-m1-cF
27 5wj7-a1-m1-cA 195 40 0.4348 0.2051 1.0000 1.74e-19 5wj7-a1-m1-cA_5wj7-a1-m1-cB
28 5wj7-a1-m1-cB 196 40 0.4348 0.2041 1.0000 1.78e-19 5wj7-a1-m1-cA_5wj7-a1-m1-cB
29 5wlz-a1-m1-cC 206 21 0.2283 0.1019 1.0000 4.75e-07 5wlz-a1-m1-cA_5wlz-a1-m1-cC, 5wlz-a1-m1-cD_5wlz-a1-m1-cC
30 7kog-a1-m1-cB 1077 45 0.2174 0.0186 0.4444 2.12e-05 7kog-a1-m1-cA_7kog-a1-m1-cB
31 7kog-a1-m1-cA 1077 45 0.2174 0.0186 0.4444 2.12e-05 7kog-a1-m1-cA_7kog-a1-m1-cB
32 5wlz-a1-m1-cD 200 18 0.1957 0.0900 1.0000 2.94e-04 5wlz-a1-m1-cA_5wlz-a1-m1-cD, 5wlz-a1-m1-cD_5wlz-a1-m1-cC
33 1zva-a1-m2-cA 75 49 0.1522 0.1867 0.2857 0.56 1zva-a1-m1-cA_1zva-a1-m2-cA
34 1zva-a1-m1-cA 75 49 0.1522 0.1867 0.2857 0.56 1zva-a1-m1-cA_1zva-a1-m2-cA
35 5wlz-a1-m1-cA 193 12 0.1304 0.0622 1.0000 1.1 5wlz-a1-m1-cA_5wlz-a1-m1-cC, 5wlz-a1-m1-cA_5wlz-a1-m1-cD
36 3swy-a1-m1-cC 46 34 0.1304 0.2609 0.3529 1.8 3swy-a1-m1-cA_3swy-a1-m1-cC
37 3swy-a1-m1-cA 46 34 0.1304 0.2609 0.3529 1.8 3swy-a1-m1-cA_3swy-a1-m1-cC
38 5jhf-a1-m1-cF 405 45 0.1630 0.0370 0.3333 4.1 5jhf-a1-m1-cC_5jhf-a1-m1-cF
39 5jhf-a1-m1-cC 404 45 0.1630 0.0371 0.3333 4.1 5jhf-a1-m1-cC_5jhf-a1-m1-cF
40 1ux4-a2-m3-cB 410 39 0.1196 0.0268 0.2821 4.6 1ux4-a2-m1-cB_1ux4-a2-m3-cB
41 1ux4-a2-m1-cB 410 39 0.1196 0.0268 0.2821 4.6 1ux4-a2-m1-cB_1ux4-a2-m3-cB
42 1ux5-a1-m2-cA 411 39 0.1196 0.0268 0.2821 4.9 1ux5-a1-m1-cA_1ux5-a1-m2-cA
43 1ux5-a1-m1-cA 411 39 0.1196 0.0268 0.2821 4.9 1ux5-a1-m1-cA_1ux5-a1-m2-cA
44 6q16-a1-m1-cAZ 57 46 0.1630 0.2632 0.3261 9.1 6q16-a1-m1-cBE_6q16-a1-m1-cAZ
45 6vsj-a1-m1-cB 1122 44 0.1522 0.0125 0.3182 9.3 6vsj-a1-m1-cA_6vsj-a1-m1-cB
46 6vsj-a1-m1-cA 1122 44 0.1522 0.0125 0.3182 9.3 6vsj-a1-m1-cA_6vsj-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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