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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
GPLPPGWEKRTDSNGRVYFVNHNTRITQWEDPRSQEKPLPEGWEMRFTVDGIPYFVDHNR
RTTTYIDPRTGKSALD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5cq2-a1-m4-cA 76 76 1.0000 1.0000 1.0000 4.49e-53 5cq2-a1-m1-cA_5cq2-a1-m4-cA, 5cq2-a1-m2-cA_5cq2-a1-m4-cA, 5cq2-a1-m3-cA_5cq2-a1-m4-cA
2 5cq2-a1-m3-cA 76 76 1.0000 1.0000 1.0000 4.49e-53 5cq2-a1-m3-cA_5cq2-a1-m4-cA
3 5cq2-a1-m2-cA 76 76 1.0000 1.0000 1.0000 4.49e-53 5cq2-a1-m2-cA_5cq2-a1-m4-cA
4 5cq2-a1-m1-cA 76 76 1.0000 1.0000 1.0000 4.49e-53 5cq2-a1-m1-cA_5cq2-a1-m4-cA
5 5dws-a1-m1-cA 37 35 0.4605 0.9459 1.0000 1.04e-20 5dws-a1-m1-cE_5dws-a1-m1-cA
6 5dws-a1-m1-cA 37 33 0.2368 0.4865 0.5455 6.25e-06 5dws-a1-m1-cE_5dws-a1-m1-cA
7 5dws-a1-m1-cE 35 35 0.4605 1.0000 1.0000 1.09e-20 5dws-a1-m1-cE_5dws-a1-m1-cA
8 5dws-a1-m1-cE 35 33 0.2368 0.5143 0.5455 6.17e-06 5dws-a1-m1-cE_5dws-a1-m1-cA
9 7bqg-a1-m2-cA 85 67 0.3553 0.3176 0.4030 1.20e-10 7bqg-a1-m1-cA_7bqg-a1-m2-cA
10 7bqg-a1-m2-cA 85 38 0.1842 0.1647 0.3684 0.013 7bqg-a1-m1-cA_7bqg-a1-m2-cA
11 7bqg-a1-m1-cA 85 67 0.3553 0.3176 0.4030 1.20e-10 7bqg-a1-m1-cA_7bqg-a1-m2-cA
12 7bqg-a1-m1-cA 85 38 0.1842 0.1647 0.3684 0.013 7bqg-a1-m1-cA_7bqg-a1-m2-cA
13 7bqf-a1-m2-cA 84 67 0.3553 0.3214 0.4030 1.46e-10 7bqf-a1-m1-cA_7bqf-a1-m2-cA
14 7bqf-a1-m2-cA 84 36 0.1711 0.1548 0.3611 0.040 7bqf-a1-m1-cA_7bqf-a1-m2-cA
15 7bqf-a1-m1-cA 84 67 0.3553 0.3214 0.4030 1.46e-10 7bqf-a1-m1-cA_7bqf-a1-m2-cA
16 7bqf-a1-m1-cA 84 36 0.1711 0.1548 0.3611 0.040 7bqf-a1-m1-cA_7bqf-a1-m2-cA
17 1pin-a1-m2-cA 153 31 0.2632 0.1307 0.6452 2.67e-07 1pin-a1-m1-cA_1pin-a1-m2-cA
18 1pin-a1-m1-cA 153 31 0.2632 0.1307 0.6452 2.67e-07 1pin-a1-m1-cA_1pin-a1-m2-cA
19 2dwv-a1-m1-cB 49 30 0.1579 0.2449 0.4000 0.019 2dwv-a1-m1-cA_2dwv-a1-m1-cB
20 2dwv-a1-m1-cB 49 30 0.1447 0.2245 0.3667 3.4 2dwv-a1-m1-cA_2dwv-a1-m1-cB
21 2dwv-a1-m1-cA 49 30 0.1579 0.2449 0.4000 0.019 2dwv-a1-m1-cA_2dwv-a1-m1-cB
22 2dwv-a1-m1-cA 49 30 0.1447 0.2245 0.3667 3.4 2dwv-a1-m1-cA_2dwv-a1-m1-cB
23 3le4-a1-m2-cA 55 32 0.1579 0.2182 0.3750 0.042 3le4-a1-m1-cA_3le4-a1-m2-cA
24 3le4-a1-m2-cA 55 31 0.1184 0.1636 0.2903 8.7 3le4-a1-m1-cA_3le4-a1-m2-cA
25 3le4-a1-m1-cA 55 32 0.1579 0.2182 0.3750 0.042 3le4-a1-m1-cA_3le4-a1-m2-cA
26 3le4-a1-m1-cA 55 31 0.1184 0.1636 0.2903 8.7 3le4-a1-m1-cA_3le4-a1-m2-cA
27 2mdw-a1-m1-cB 27 30 0.1711 0.4815 0.4333 2.2 2mdw-a1-m1-cA_2mdw-a1-m1-cB
28 2mdw-a1-m1-cA 27 30 0.1711 0.4815 0.4333 2.2 2mdw-a1-m1-cA_2mdw-a1-m1-cB
29 4y2f-a1-m2-cA 143 48 0.2105 0.1119 0.3333 2.6 4y2f-a1-m1-cA_4y2f-a1-m2-cA
30 4y2f-a1-m1-cA 143 48 0.2105 0.1119 0.3333 2.6 4y2f-a1-m1-cA_4y2f-a1-m2-cA
31 2iv0-a1-m1-cB 412 50 0.1711 0.0316 0.2600 3.2 2iv0-a1-m1-cA_2iv0-a1-m1-cB
32 2iv0-a1-m1-cA 412 50 0.1711 0.0316 0.2600 3.2 2iv0-a1-m1-cA_2iv0-a1-m1-cB
33 3ngx-a1-m1-cB 275 22 0.1316 0.0364 0.4545 4.2 3ngx-a1-m1-cA_3ngx-a1-m1-cB
34 3ngx-a1-m1-cA 275 22 0.1316 0.0364 0.4545 4.2 3ngx-a1-m1-cA_3ngx-a1-m1-cB
35 5goa-a1-m1-cD 3423 21 0.1316 0.0029 0.4762 4.7 5goa-a1-m1-cC_5goa-a1-m1-cD
36 5goa-a1-m1-cC 3423 21 0.1316 0.0029 0.4762 4.7 5goa-a1-m1-cC_5goa-a1-m1-cD
37 6jh6-a1-m1-cH 3454 21 0.1316 0.0029 0.4762 4.7 6jh6-a1-m1-cF_6jh6-a1-m1-cH
38 6jh6-a1-m1-cF 3454 21 0.1316 0.0029 0.4762 4.7 6jh6-a1-m1-cF_6jh6-a1-m1-cH
39 6jg3-a1-m1-cD 3477 21 0.1316 0.0029 0.4762 4.7 6jg3-a1-m1-cB_6jg3-a1-m1-cD
40 6jg3-a1-m1-cB 3477 21 0.1316 0.0029 0.4762 4.7 6jg3-a1-m1-cB_6jg3-a1-m1-cD
41 6jgz-a1-m1-cH 3485 21 0.1316 0.0029 0.4762 4.7 6jgz-a1-m1-cF_6jgz-a1-m1-cH
42 6jgz-a1-m1-cF 3485 21 0.1316 0.0029 0.4762 4.7 6jgz-a1-m1-cF_6jgz-a1-m1-cH
43 6jrs-a1-m1-cJ 3488 21 0.1316 0.0029 0.4762 4.7 6jrs-a1-m1-cG_6jrs-a1-m1-cJ
44 6jrs-a1-m1-cG 3488 21 0.1316 0.0029 0.4762 4.7 6jrs-a1-m1-cG_6jrs-a1-m1-cJ
45 6jii-a1-m1-cK 3508 21 0.1316 0.0029 0.4762 4.7 6jii-a1-m1-cH_6jii-a1-m1-cK
46 6jii-a1-m1-cH 3508 21 0.1316 0.0029 0.4762 4.7 6jii-a1-m1-cH_6jii-a1-m1-cK
47 6ji8-a1-m1-cJ 3511 21 0.1316 0.0028 0.4762 4.7 6ji8-a1-m1-cG_6ji8-a1-m1-cJ
48 6ji8-a1-m1-cG 3511 21 0.1316 0.0028 0.4762 4.7 6ji8-a1-m1-cG_6ji8-a1-m1-cJ
49 5l1d-a1-m1-cG 3570 21 0.1316 0.0028 0.4762 5.2 5l1d-a1-m1-cE_5l1d-a1-m1-cG
50 5l1d-a1-m1-cE 3570 21 0.1316 0.0028 0.4762 5.2 5l1d-a1-m1-cE_5l1d-a1-m1-cG
51 1ulz-a1-m2-cA 451 24 0.1579 0.0266 0.5000 6.7 1ulz-a1-m1-cA_1ulz-a1-m2-cA
52 1ulz-a1-m1-cA 451 24 0.1579 0.0266 0.5000 6.7 1ulz-a1-m1-cA_1ulz-a1-m2-cA
53 1v29-a1-m2-cB 229 64 0.2500 0.0830 0.2969 7.7 1v29-a1-m1-cB_1v29-a1-m2-cB
54 1v29-a1-m1-cB 229 64 0.2500 0.0830 0.2969 7.7 1v29-a1-m1-cB_1v29-a1-m2-cB
55 6iym-a1-m1-cB 277 36 0.1579 0.0433 0.3333 8.1 6iym-a1-m1-cA_6iym-a1-m1-cB
56 6iym-a1-m1-cA 277 36 0.1579 0.0433 0.3333 8.1 6iym-a1-m1-cA_6iym-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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