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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=49)
GPMANSSVELRVAEAYPEDVGRGIVRMDKQTRAKLGVSVGDYVEVKKVD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7dxs-a2-m1-cC 49 49 1.0000 1.0000 1.0000 1.22e-29 7dxs-a2-m1-cD_7dxs-a2-m1-cC
2 7dxs-a2-m1-cD 44 44 0.8980 1.0000 1.0000 3.53e-25 7dxs-a2-m1-cD_7dxs-a2-m1-cC
3 7dxt-a1-m2-cA 43 42 0.7347 0.8372 0.8571 1.27e-17 7dxt-a1-m1-cA_7dxt-a1-m2-cA
4 7dxt-a1-m1-cA 43 42 0.7347 0.8372 0.8571 1.27e-17 7dxt-a1-m1-cA_7dxt-a1-m2-cA
5 7dxz-a1-m3-cA 42 31 0.4286 0.5000 0.6774 0.12 7dxz-a1-m1-cA_7dxz-a1-m3-cA
6 7dxz-a1-m1-cA 42 31 0.4286 0.5000 0.6774 0.12 7dxz-a1-m1-cA_7dxz-a1-m3-cA
7 6rwa-a1-m1-cE 2361 40 0.2653 0.0055 0.3250 0.42 6rwa-a1-m1-cC_6rwa-a1-m1-cE, 6rwa-a1-m1-cD_6rwa-a1-m1-cE
8 6rwa-a1-m1-cD 2361 40 0.2653 0.0055 0.3250 0.42 6rwa-a1-m1-cD_6rwa-a1-m1-cE
9 6rwa-a1-m1-cC 2361 40 0.2653 0.0055 0.3250 0.42 6rwa-a1-m1-cC_6rwa-a1-m1-cE
10 6rwb-a1-m1-cE 1873 37 0.2653 0.0069 0.3514 1.6 6rwb-a1-m1-cC_6rwb-a1-m1-cE, 6rwb-a1-m1-cD_6rwb-a1-m1-cE
11 6rwb-a1-m1-cD 1873 37 0.2653 0.0069 0.3514 1.6 6rwb-a1-m1-cD_6rwb-a1-m1-cE
12 6rwb-a1-m1-cC 1873 37 0.2653 0.0069 0.3514 1.6 6rwb-a1-m1-cC_6rwb-a1-m1-cE
13 3l5z-a1-m1-cB 139 20 0.2245 0.0791 0.5500 8.5 3l5z-a1-m1-cA_3l5z-a1-m1-cB
14 3l5z-a1-m1-cA 139 20 0.2245 0.0791 0.5500 8.5 3l5z-a1-m1-cA_3l5z-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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