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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=61)
GPNKETINREVSILRHSYQKEIQAKETMKEVLSDNMEVLSDHIVIEGLSAEEIIKMGETV
L

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2kj1-a1-m1-cC 61 61 1.0000 1.0000 1.0000 1.24e-38 2kj1-a1-m1-cB_2kj1-a1-m1-cC
2 2kj1-a1-m1-cB 61 61 1.0000 1.0000 1.0000 1.24e-38 2kj1-a1-m1-cB_2kj1-a1-m1-cC
3 6o6q-a1-m2-cB 325 41 0.2131 0.0400 0.3171 3.9 6o6q-a1-m1-cB_6o6q-a1-m2-cB, 6o6q-a1-m2-cB_6o6q-a1-m2-cA
4 6o6q-a1-m1-cB 325 41 0.2131 0.0400 0.3171 3.9 6o6q-a1-m1-cB_6o6q-a1-m2-cB
5 6o6q-a1-m2-cA 326 41 0.2131 0.0399 0.3171 4.0 6o6q-a1-m2-cB_6o6q-a1-m2-cA
6 2gk4-a1-m1-cB 215 19 0.1639 0.0465 0.5263 7.6 2gk4-a1-m1-cB_2gk4-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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