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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
GPPAPRHLHAQALSDSEIQLTWKHPEALPGPISKYVVEVQVAGDPLWIDVDRPEETSTII
RGLNASTRYLFRMRASIQGLGDWSNTVEESTLG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5n06-a1-m1-cA 93 93 1.0000 1.0000 1.0000 3.07e-65 5n06-a1-m1-cB_5n06-a1-m1-cA
2 5n06-a1-m1-cB 88 91 0.9462 1.0000 0.9670 4.50e-59 5n06-a1-m1-cB_5n06-a1-m1-cA
3 4bkf-a1-m1-cB 505 93 0.2796 0.0515 0.2796 0.003 4bkf-a1-m1-cA_4bkf-a1-m1-cB
4 4bkf-a1-m1-cA 505 93 0.2796 0.0515 0.2796 0.003 4bkf-a1-m1-cA_4bkf-a1-m1-cB
5 7r3n-a2-m1-cC 302 46 0.1398 0.0430 0.2826 0.022 7r3n-a2-m1-cC_7r3n-a2-m1-cD
6 7r3n-a2-m1-cD 305 43 0.1290 0.0393 0.2791 0.047 7r3n-a2-m1-cC_7r3n-a2-m1-cD
7 7mrm-a1-m1-cA 365 81 0.2043 0.0521 0.2346 0.099 7mrm-a1-m1-cB_7mrm-a1-m1-cA
8 7mrm-a1-m1-cB 360 81 0.2043 0.0528 0.2346 0.10 7mrm-a1-m1-cB_7mrm-a1-m1-cA
9 4yfg-a1-m1-cB 481 34 0.1613 0.0312 0.4412 0.13 4yfg-a1-m1-cA_4yfg-a1-m1-cB
10 4yfg-a1-m1-cA 481 34 0.1613 0.0312 0.4412 0.13 4yfg-a1-m1-cA_4yfg-a1-m1-cB
11 5fn8-a2-m3-cA 178 58 0.1720 0.0899 0.2759 0.14 5fn8-a2-m1-cA_5fn8-a2-m3-cA
12 5fn8-a2-m1-cA 178 58 0.1720 0.0899 0.2759 0.14 5fn8-a2-m1-cA_5fn8-a2-m3-cA
13 8avf-a1-m1-cD 596 86 0.2151 0.0336 0.2326 0.18 8avf-a1-m1-cB_8avf-a1-m1-cD
14 8avf-a1-m1-cB 596 86 0.2151 0.0336 0.2326 0.18 8avf-a1-m1-cB_8avf-a1-m1-cD
15 5myb-a1-m1-cB 191 107 0.2688 0.1309 0.2336 0.50 5myb-a1-m1-cA_5myb-a1-m1-cB
16 5utk-a1-m1-cB 280 94 0.2688 0.0893 0.2660 0.70 5utk-a1-m1-cB_5utk-a1-m1-cA
17 5myb-a1-m1-cA 190 97 0.2903 0.1421 0.2784 1.3 5myb-a1-m1-cA_5myb-a1-m1-cB
18 5utk-a1-m1-cA 289 97 0.2903 0.0934 0.2784 2.7 5utk-a1-m1-cB_5utk-a1-m1-cA
19 1p91-a1-m1-cB 251 28 0.1290 0.0478 0.4286 7.9 1p91-a1-m1-cB_1p91-a1-m1-cA
20 1p91-a1-m1-cA 261 28 0.1290 0.0460 0.4286 8.2 1p91-a1-m1-cB_1p91-a1-m1-cA
21 7y8s-a1-m1-cB 288 82 0.2258 0.0729 0.2561 8.9 7y8s-a1-m1-cA_7y8s-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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