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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
GPPAVLLRLSDASGKFEFTEVARGLKVKRNLLDSNDVFVLYTGAEVFAWVGKHASVGEKK
KALSFAQEYVQKAGLPIHTPVARILEGGENEVFEDFFD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6kwz-a1-m2-cB 98 98 1.0000 1.0000 1.0000 5.28e-68 6kwz-a1-m1-cA_6kwz-a1-m2-cB
2 6kwz-a1-m1-cA 98 98 1.0000 1.0000 1.0000 5.28e-68 6kwz-a1-m1-cA_6kwz-a1-m2-cB
3 5a1m-a1-m2-cA 104 96 0.3571 0.3365 0.3646 1.89e-13 5a1m-a1-m1-cA_5a1m-a1-m2-cA
4 5a1m-a1-m1-cA 104 96 0.3571 0.3365 0.3646 1.89e-13 5a1m-a1-m1-cA_5a1m-a1-m2-cA
5 1j72-a2-m2-cA 337 94 0.3061 0.0890 0.3191 4.08e-10 1j72-a2-m1-cA_1j72-a2-m2-cA
6 1j72-a2-m2-cA 337 62 0.1939 0.0564 0.3065 0.002 1j72-a2-m1-cA_1j72-a2-m2-cA
7 1j72-a2-m1-cA 337 94 0.3061 0.0890 0.3191 4.08e-10 1j72-a2-m1-cA_1j72-a2-m2-cA
8 1j72-a2-m1-cA 337 62 0.1939 0.0564 0.3065 0.002 1j72-a2-m1-cA_1j72-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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