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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=46)
GPPGPKGDPGPKGDPGPPGARGQAGVGFGPPGPPGPKGDKGDPGGY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6q3p-a1-m1-cB 46 46 1.0000 1.0000 1.0000 3.47e-20 6q3p-a1-m1-cA_6q3p-a1-m1-cB
2 6q3p-a1-m1-cA 46 46 1.0000 1.0000 1.0000 3.47e-20 6q3p-a1-m1-cA_6q3p-a1-m1-cB
3 6q41-a1-m1-cC 46 27 0.5000 0.5000 0.8519 1.05e-05 6q41-a1-m1-cB_6q41-a1-m1-cC
4 6q41-a1-m1-cC 46 19 0.3478 0.3478 0.8421 4.2 6q41-a1-m1-cB_6q41-a1-m1-cC
5 6q41-a1-m1-cB 46 27 0.5000 0.5000 0.8519 1.05e-05 6q41-a1-m1-cB_6q41-a1-m1-cC
6 6q41-a1-m1-cB 46 19 0.3478 0.3478 0.8421 4.2 6q41-a1-m1-cB_6q41-a1-m1-cC
7 3hr2-a1-m9-cB 944 47 0.4783 0.0233 0.4681 1.2 3hr2-a1-m7-cB_3hr2-a1-m9-cB, 3hr2-a1-m8-cB_3hr2-a1-m9-cB
8 3hr2-a1-m9-cB 944 58 0.5652 0.0275 0.4483 2.7 3hr2-a1-m7-cB_3hr2-a1-m9-cB, 3hr2-a1-m8-cB_3hr2-a1-m9-cB
9 3hr2-a1-m8-cB 944 47 0.4783 0.0233 0.4681 1.2 3hr2-a1-m8-cB_3hr2-a1-m9-cB
10 3hr2-a1-m8-cB 944 58 0.5652 0.0275 0.4483 2.7 3hr2-a1-m8-cB_3hr2-a1-m9-cB
11 3hr2-a1-m7-cB 944 47 0.4783 0.0233 0.4681 1.2 3hr2-a1-m7-cB_3hr2-a1-m9-cB
12 3hr2-a1-m7-cB 944 58 0.5652 0.0275 0.4483 2.7 3hr2-a1-m7-cB_3hr2-a1-m9-cB
13 3hr2-a1-m9-cC 939 45 0.5217 0.0256 0.5333 6.7 3hr2-a1-m9-cA_3hr2-a1-m9-cC
14 3hr2-a1-m9-cC 939 19 0.3261 0.0160 0.7895 9.7 3hr2-a1-m9-cA_3hr2-a1-m9-cC
15 3hr2-a1-m9-cA 939 45 0.5217 0.0256 0.5333 6.7 3hr2-a1-m9-cA_3hr2-a1-m9-cC
16 3hr2-a1-m9-cA 939 19 0.3261 0.0160 0.7895 9.7 3hr2-a1-m9-cA_3hr2-a1-m9-cC
17 3hqv-a1-m9-cA 939 45 0.5217 0.0256 0.5333 6.7 3hqv-a1-m8-cC_3hqv-a1-m9-cA
18 3hqv-a1-m9-cA 939 19 0.3261 0.0160 0.7895 9.7 3hqv-a1-m8-cC_3hqv-a1-m9-cA
19 3hqv-a1-m8-cC 939 45 0.5217 0.0256 0.5333 6.7 3hqv-a1-m8-cC_3hqv-a1-m9-cA
20 3hqv-a1-m8-cC 939 19 0.3261 0.0160 0.7895 9.7 3hqv-a1-m8-cC_3hqv-a1-m9-cA
21 3hqv-a1-m3-cA 939 45 0.5217 0.0256 0.5333 6.7 3hqv-a1-m1-cA_3hqv-a1-m3-cA
22 3hqv-a1-m3-cA 939 19 0.3261 0.0160 0.7895 9.7 3hqv-a1-m1-cA_3hqv-a1-m3-cA
23 3hqv-a1-m1-cA 939 45 0.5217 0.0256 0.5333 6.7 3hqv-a1-m1-cA_3hqv-a1-m3-cA
24 3hqv-a1-m1-cA 939 19 0.3261 0.0160 0.7895 9.7 3hqv-a1-m1-cA_3hqv-a1-m3-cA
25 7p91-a1-m1-cA 554 16 0.1957 0.0162 0.5625 7.8 7p91-a1-m1-cA_7p91-a1-m1-ca
26 7p5h-a1-m1-cd 554 16 0.1957 0.0162 0.5625 7.8 7p5h-a1-m1-cA_7p5h-a1-m1-cd
27 7p5h-a1-m1-cA 554 16 0.1957 0.0162 0.5625 7.8 7p5h-a1-m1-cA_7p5h-a1-m1-cd
28 7p91-a1-m1-ca 642 16 0.1957 0.0140 0.5625 8.1 7p91-a1-m1-cA_7p91-a1-m1-ca

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Reference:
Jacob Schwartz et al.

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