Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=22)
GPPGPPGPPGTGPPGPPGPPGP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3a1h-a1-m1-cA 22 22 1.0000 1.0000 1.0000 0.001 3a1h-a1-m1-cA_3a1h-a1-m1-cC
2 3a1h-a1-m1-cC 23 22 1.0000 0.9565 1.0000 0.001 3a1h-a1-m1-cA_3a1h-a1-m1-cC
3 2d3h-a2-m1-cD 23 22 0.9545 0.9130 0.9545 0.81 2d3h-a2-m1-cF_2d3h-a2-m1-cD
4 3a19-a3-m1-cC 24 22 0.9545 0.8750 0.9545 1.1 3a19-a3-m1-cB_3a19-a3-m1-cC
5 7umz-a1-m1-cD 3927 13 0.3182 0.0018 0.5385 8.3 7umz-a1-m1-cC_7umz-a1-m1-cD
6 7umz-a1-m1-cC 3927 13 0.3182 0.0018 0.5385 8.3 7umz-a1-m1-cC_7umz-a1-m1-cD
7 7m6a-a1-m1-cI 4306 13 0.3182 0.0016 0.5385 8.7 7m6a-a1-m1-cG_7m6a-a1-m1-cI
8 7m6a-a1-m1-cG 4306 13 0.3182 0.0016 0.5385 8.7 7m6a-a1-m1-cG_7m6a-a1-m1-cI
9 7k0t-a1-m1-cD 4105 13 0.3182 0.0017 0.5385 8.7 7k0t-a1-m1-cC_7k0t-a1-m1-cD
10 7k0t-a1-m1-cC 4105 13 0.3182 0.0017 0.5385 8.7 7k0t-a1-m1-cC_7k0t-a1-m1-cD
11 7m6l-a1-m1-cI 4299 13 0.3182 0.0016 0.5385 9.3 7m6l-a1-m1-cG_7m6l-a1-m1-cI
12 7m6l-a1-m1-cG 4299 13 0.3182 0.0016 0.5385 9.3 7m6l-a1-m1-cG_7m6l-a1-m1-cI
13 7t64-a1-m1-cD 4247 13 0.3182 0.0016 0.5385 9.3 7t64-a1-m1-cC_7t64-a1-m1-cD
14 7t64-a1-m1-cC 4247 13 0.3182 0.0016 0.5385 9.3 7t64-a1-m1-cC_7t64-a1-m1-cD
15 6wot-a1-m1-cD 4197 13 0.3182 0.0017 0.5385 9.8 6wot-a1-m1-cB_6wot-a1-m1-cD, 6wot-a1-m1-cC_6wot-a1-m1-cD
16 6wot-a1-m1-cC 4197 13 0.3182 0.0017 0.5385 9.8 6wot-a1-m1-cC_6wot-a1-m1-cD
17 6wot-a1-m1-cB 4197 13 0.3182 0.0017 0.5385 9.8 6wot-a1-m1-cB_6wot-a1-m1-cD
18 7tdj-a1-m1-cD 4133 13 0.3182 0.0017 0.5385 9.9 7tdj-a1-m1-cC_7tdj-a1-m1-cD
19 7tdj-a1-m1-cC 4133 13 0.3182 0.0017 0.5385 9.9 7tdj-a1-m1-cC_7tdj-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600