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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=41)
GPSKPFWVLVVVGGVLAFYSLLVTVAFIIFWVRSKRSRLLH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7vu5-a1-m1-cB 41 41 1.0000 1.0000 1.0000 8.76e-23 7vu5-a1-m1-cA_7vu5-a1-m1-cB
2 7vu5-a1-m1-cA 41 41 1.0000 1.0000 1.0000 8.76e-23 7vu5-a1-m1-cA_7vu5-a1-m1-cB
3 3zdq-a1-m2-cA 570 18 0.2195 0.0158 0.5000 4.8 3zdq-a1-m1-cA_3zdq-a1-m2-cA
4 3zdq-a1-m1-cA 570 18 0.2195 0.0158 0.5000 4.8 3zdq-a1-m1-cA_3zdq-a1-m2-cA
5 5vkq-a1-m1-cD 1499 27 0.2195 0.0060 0.3333 5.6 5vkq-a1-m1-cC_5vkq-a1-m1-cD
6 5vkq-a1-m1-cC 1499 27 0.2195 0.0060 0.3333 5.6 5vkq-a1-m1-cC_5vkq-a1-m1-cD
7 2qjw-a2-m1-cC 171 26 0.2195 0.0526 0.3462 8.9 2qjw-a2-m1-cD_2qjw-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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