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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=35)
GPSQPTYPGDDAPVEDLIRFYNDLQQYLNVVTRHR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2bf9-a1-m2-cA 35 35 1.0000 1.0000 1.0000 8.20e-21 2bf9-a1-m1-cA_2bf9-a1-m2-cA
2 2bf9-a1-m1-cA 35 35 1.0000 1.0000 1.0000 8.20e-21 2bf9-a1-m1-cA_2bf9-a1-m2-cA
3 2h4b-a1-m1-cD 24 23 0.6571 0.9583 1.0000 5.84e-11 2h4b-a1-m1-cC_2h4b-a1-m1-cD
4 2h4b-a1-m1-cC 24 23 0.6571 0.9583 1.0000 5.84e-11 2h4b-a1-m1-cC_2h4b-a1-m1-cD
5 1j5t-a2-m4-cA 233 22 0.2571 0.0386 0.4091 0.76 1j5t-a2-m1-cA_1j5t-a2-m4-cA, 1j5t-a2-m2-cA_1j5t-a2-m4-cA, 1j5t-a2-m3-cA_1j5t-a2-m4-cA
6 1j5t-a2-m3-cA 233 22 0.2571 0.0386 0.4091 0.76 1j5t-a2-m3-cA_1j5t-a2-m4-cA
7 1j5t-a2-m2-cA 233 22 0.2571 0.0386 0.4091 0.76 1j5t-a2-m2-cA_1j5t-a2-m4-cA
8 1j5t-a2-m1-cA 233 22 0.2571 0.0386 0.4091 0.76 1j5t-a2-m1-cA_1j5t-a2-m4-cA
9 5kva-a1-m1-cA 227 20 0.3143 0.0485 0.5500 0.82 5kva-a1-m1-cA_5kva-a1-m1-cB
10 5kva-a1-m1-cB 228 20 0.3143 0.0482 0.5500 0.83 5kva-a1-m1-cA_5kva-a1-m1-cB
11 6sws-a3-m2-cE 97 30 0.2571 0.0928 0.3000 3.7 6sws-a3-m2-cE_6sws-a3-m1-cD
12 7p4i-a1-m1-cC 428 12 0.2286 0.0187 0.6667 6.8 7p4i-a1-m1-cB_7p4i-a1-m1-cC
13 7p4i-a1-m1-cB 428 12 0.2286 0.0187 0.6667 6.8 7p4i-a1-m1-cB_7p4i-a1-m1-cC
14 8a0c-a1-m1-cA 1116 19 0.2857 0.0090 0.5263 8.6 8a0c-a1-m1-cB_8a0c-a1-m1-cA
15 8a0c-a1-m1-cB 1113 19 0.2857 0.0090 0.5263 8.8 8a0c-a1-m1-cB_8a0c-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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