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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
GQAVNIRSMETDIVSLDDRLLQAFSGSAIATAVDKQTITNRIEDPNLVTDPKELAISQEM
ISDYNLYVSMVSTLTRKGVGAVETLLRS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7ahi-a1-m1-c1K 90 88 1.0000 0.9778 1.0000 9.53e-60 7ahi-a1-m1-c1K_7ahi-a1-m1-c1L
2 6q16-a1-m1-cAR 88 88 1.0000 1.0000 1.0000 1.18e-59 6q16-a1-m1-cAM_6q16-a1-m1-cAR
3 7ahi-a1-m1-c1L 94 88 1.0000 0.9362 1.0000 1.19e-59 7ahi-a1-m1-c1K_7ahi-a1-m1-c1L
4 6q16-a1-m1-cAM 39 39 0.4432 1.0000 1.0000 3.58e-22 6q16-a1-m1-cAM_6q16-a1-m1-cAR
5 8axk-a1-m1-cR 85 78 0.3182 0.3294 0.3590 3.34e-07 8axk-a1-m1-cM_8axk-a1-m1-cR
6 8axk-a1-m1-cM 42 39 0.2273 0.4762 0.5128 3.03e-06 8axk-a1-m1-cM_8axk-a1-m1-cR
7 7ahi-a1-m1-c2C 59 19 0.1136 0.1695 0.5263 4.8 7ahi-a1-m1-c2C_7ahi-a1-m1-c2I
8 7ahi-a1-m1-c2B 60 19 0.1136 0.1667 0.5263 5.3 7ahi-a1-m1-c2B_7ahi-a1-m1-c2M
9 7ahi-a1-m1-c2I 75 19 0.1136 0.1333 0.5263 6.6 7ahi-a1-m1-c2C_7ahi-a1-m1-c2I
10 3zu2-a1-m2-cA 415 33 0.1364 0.0289 0.3636 6.7 3zu2-a1-m1-cA_3zu2-a1-m2-cA
11 3zu2-a1-m1-cA 415 33 0.1364 0.0289 0.3636 6.7 3zu2-a1-m1-cA_3zu2-a1-m2-cA
12 7ahi-a1-m1-c2E 68 19 0.1136 0.1471 0.5263 7.1 7ahi-a1-m1-c2E_7ahi-a1-m1-c2K, 7ahi-a1-m1-c2E_7ahi-a1-m1-c2P
13 7ahi-a1-m1-c2M 78 19 0.1136 0.1282 0.5263 7.3 7ahi-a1-m1-c2B_7ahi-a1-m1-c2M
14 6off-a1-m1-cK 78 19 0.1136 0.1282 0.5263 7.3 6off-a1-m1-cF_6off-a1-m1-cK
15 6off-a1-m1-cJ 78 19 0.1136 0.1282 0.5263 7.3 6off-a1-m1-cD_6off-a1-m1-cJ
16 6off-a1-m1-cF 78 19 0.1136 0.1282 0.5263 7.3 6off-a1-m1-cF_6off-a1-m1-cK
17 6off-a1-m1-cD 78 19 0.1136 0.1282 0.5263 7.3 6off-a1-m1-cD_6off-a1-m1-cJ
18 6dwb-a1-m1-cN 78 19 0.1136 0.1282 0.5263 7.3 6dwb-a1-m1-cC_6dwb-a1-m1-cN
19 6dwb-a1-m1-cJ 78 19 0.1136 0.1282 0.5263 7.3 6dwb-a1-m1-cE_6dwb-a1-m1-cJ
20 6dwb-a1-m1-cE 78 19 0.1136 0.1282 0.5263 7.3 6dwb-a1-m1-cE_6dwb-a1-m1-cJ
21 6dwb-a1-m1-cC 78 19 0.1136 0.1282 0.5263 7.3 6dwb-a1-m1-cC_6dwb-a1-m1-cN
22 7ahi-a1-m1-c2P 77 19 0.1136 0.1299 0.5263 7.4 7ahi-a1-m1-c2E_7ahi-a1-m1-c2P
23 7ahi-a1-m1-c2K 77 19 0.1136 0.1299 0.5263 7.4 7ahi-a1-m1-c2E_7ahi-a1-m1-c2K

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Reference:
Jacob Schwartz et al.

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