Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
GQCLYKISSYTSYPMHDFYRCHTCNRNAICVNCIKKCHQGHDVEFIRHDRFFCDCGAGTL
SNPCTL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5vmd-a2-m1-cD 66 66 1.0000 1.0000 1.0000 1.67e-45 5vmd-a2-m1-cD_5vmd-a2-m1-cB
2 5vmd-a2-m1-cB 72 67 1.0000 0.9167 0.9851 1.11e-43 5vmd-a2-m1-cD_5vmd-a2-m1-cB
3 8e0q-a1-m1-cB 1689 44 0.2273 0.0089 0.3409 7.83e-04 8e0q-a1-m1-cA_8e0q-a1-m1-cB
4 8e0q-a1-m1-cA 1689 44 0.2273 0.0089 0.3409 7.83e-04 8e0q-a1-m1-cA_8e0q-a1-m1-cB
5 8ewi-a1-m1-cD 1775 44 0.2273 0.0085 0.3409 7.83e-04 8ewi-a1-m1-cB_8ewi-a1-m1-cD
6 8ewi-a1-m1-cB 1775 44 0.2273 0.0085 0.3409 7.83e-04 8ewi-a1-m1-cB_8ewi-a1-m1-cD
7 7xwd-a1-m2-cA 70 49 0.3030 0.2857 0.4082 0.066 7xwd-a1-m1-cA_7xwd-a1-m2-cA
8 7xwd-a1-m1-cA 70 49 0.3030 0.2857 0.4082 0.066 7xwd-a1-m1-cA_7xwd-a1-m2-cA
9 7xwf-a1-m2-cA 73 49 0.3030 0.2740 0.4082 0.069 7xwf-a1-m1-cA_7xwf-a1-m2-cA
10 7xwf-a1-m1-cA 73 49 0.3030 0.2740 0.4082 0.069 7xwf-a1-m1-cA_7xwf-a1-m2-cA
11 7xwg-a1-m1-cB 72 49 0.3030 0.2778 0.4082 0.071 7xwg-a1-m1-cA_7xwg-a1-m1-cB
12 7xwg-a1-m1-cA 72 49 0.3030 0.2778 0.4082 0.071 7xwg-a1-m1-cA_7xwg-a1-m1-cB
13 7xwe-a1-m1-cB 76 49 0.3030 0.2632 0.4082 0.078 7xwe-a1-m1-cA_7xwe-a1-m1-cB
14 7xwe-a1-m1-cA 76 49 0.3030 0.2632 0.4082 0.078 7xwe-a1-m1-cA_7xwe-a1-m1-cB
15 6kw5-a1-m1-cH 393 56 0.2424 0.0407 0.2857 1.8 6kw5-a1-m1-cD_6kw5-a1-m1-cH
16 3zc0-a3-m4-cH 187 40 0.1515 0.0535 0.2500 8.9 3zc0-a3-m4-cH_3zc0-a3-m1-cK, 3zc0-a3-m4-cH_3zc0-a3-m4-cG
17 3zc0-a3-m4-cG 189 40 0.1515 0.0529 0.2500 9.0 3zc0-a3-m4-cH_3zc0-a3-m4-cG
18 3zc0-a3-m1-cK 189 40 0.1515 0.0529 0.2500 9.0 3zc0-a3-m4-cH_3zc0-a3-m1-cK

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600