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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
GQIFTVQELKERAKVFAKPIGASYQGILDQLDLVHQAKGRDQIAASFELNKKINDYIAEH
PTSGRNQALTQLKEQVTSALGLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4err-a1-m1-cB 83 83 1.0000 1.0000 1.0000 6.98e-57 4err-a1-m1-cA_4err-a1-m1-cB
2 4err-a1-m1-cA 82 82 0.9880 1.0000 1.0000 4.38e-56 4err-a1-m1-cA_4err-a1-m1-cB
3 5w6l-a1-m1-cA 482 74 0.8916 0.1535 1.0000 2.31e-45 5w6l-a1-m1-cB_5w6l-a1-m1-cA
4 5w6l-a1-m1-cB 480 74 0.8675 0.1500 0.9730 7.80e-42 5w6l-a1-m1-cB_5w6l-a1-m1-cA
5 1x0u-a1-m1-cE 518 50 0.1928 0.0309 0.3200 0.64 1x0u-a1-m1-cB_1x0u-a1-m1-cE, 1x0u-a1-m1-cD_1x0u-a1-m1-cE
6 1x0u-a1-m1-cD 518 50 0.1928 0.0309 0.3200 0.64 1x0u-a1-m1-cD_1x0u-a1-m1-cE
7 1x0u-a1-m1-cB 518 50 0.1928 0.0309 0.3200 0.64 1x0u-a1-m1-cB_1x0u-a1-m1-cE
8 7naa-a2-m1-cD 234 38 0.1446 0.0513 0.3158 3.2 7naa-a2-m1-cC_7naa-a2-m1-cD
9 2amf-a1-m2-cE 259 30 0.1446 0.0463 0.4000 3.8 2amf-a1-m2-cA_2amf-a1-m2-cE
10 2amf-a1-m2-cA 257 30 0.1446 0.0467 0.4000 3.9 2amf-a1-m2-cA_2amf-a1-m2-cE
11 7my7-a2-m1-cDDD 259 27 0.1325 0.0425 0.4074 6.9 7my7-a2-m1-cCCC_7my7-a2-m1-cDDD
12 3px3-a1-m1-cD 240 21 0.1446 0.0500 0.5714 7.9 3px3-a1-m1-cA_3px3-a1-m1-cD
13 3px3-a1-m1-cA 240 21 0.1446 0.0500 0.5714 7.9 3px3-a1-m1-cA_3px3-a1-m1-cD
14 5ice-a1-m2-cA 351 82 0.2771 0.0655 0.2805 9.7 5ice-a1-m1-cA_5ice-a1-m2-cA
15 5ice-a1-m1-cA 351 82 0.2771 0.0655 0.2805 9.7 5ice-a1-m1-cA_5ice-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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