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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
GQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRA
LRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5e8i-a2-m1-cJ 93 93 1.0000 1.0000 1.0000 2.49e-68 5e8i-a2-m1-cD_5e8i-a2-m1-cJ
2 5e8i-a2-m1-cD 93 93 1.0000 1.0000 1.0000 2.49e-68 5e8i-a2-m1-cD_5e8i-a2-m1-cJ
3 5ybc-a1-m1-cA 92 92 0.9677 0.9783 0.9783 1.03e-66 5ybc-a1-m1-cC_5ybc-a1-m1-cA
4 5ybc-a1-m1-cC 91 91 0.9570 0.9780 0.9780 1.43e-65 5ybc-a1-m1-cC_5ybc-a1-m1-cA
5 2ypr-a1-m1-cA 96 93 0.8710 0.8438 0.8710 3.04e-60 2ypr-a1-m1-cB_2ypr-a1-m1-cA
6 2ypr-a1-m1-cB 92 92 0.8602 0.8696 0.8696 2.69e-59 2ypr-a1-m1-cB_2ypr-a1-m1-cA
7 2nny-a1-m1-cB 129 82 0.6129 0.4419 0.6951 4.00e-39 2nny-a1-m1-cA_2nny-a1-m1-cB
8 2nny-a1-m1-cA 129 82 0.6129 0.4419 0.6951 4.00e-39 2nny-a1-m1-cA_2nny-a1-m1-cB
9 3wu0-a1-m1-cB 136 82 0.6129 0.4191 0.6951 2.46e-38 3wu0-a1-m1-cB_3wu0-a1-m1-cA
10 6dat-a2-m1-cD 135 82 0.6129 0.4222 0.6951 2.64e-38 6dat-a2-m1-cC_6dat-a2-m1-cD
11 6dat-a2-m1-cC 135 82 0.6129 0.4222 0.6951 2.64e-38 6dat-a2-m1-cC_6dat-a2-m1-cD
12 3wu0-a1-m1-cA 140 82 0.6129 0.4071 0.6951 2.71e-38 3wu0-a1-m1-cB_3wu0-a1-m1-cA
13 1gvj-a1-m1-cA 141 82 0.6129 0.4043 0.6951 3.18e-38 1gvj-a1-m1-cA_1gvj-a1-m1-cB
14 1gvj-a1-m1-cB 146 82 0.6129 0.3904 0.6951 3.53e-38 1gvj-a1-m1-cA_1gvj-a1-m1-cB
15 5ilv-a2-m2-cA 92 82 0.5699 0.5761 0.6463 6.17e-36 5ilv-a2-m1-cA_5ilv-a2-m2-cA
16 5ilv-a2-m1-cA 92 82 0.5699 0.5761 0.6463 6.17e-36 5ilv-a2-m1-cA_5ilv-a2-m2-cA
17 4uuv-a2-m1-cG 95 80 0.5376 0.5263 0.6250 2.03e-33 4uuv-a2-m1-cD_4uuv-a2-m1-cG
18 4uuv-a2-m1-cD 95 80 0.5376 0.5263 0.6250 2.03e-33 4uuv-a2-m1-cD_4uuv-a2-m1-cG
19 1dux-a1-m1-cF 86 81 0.5376 0.5814 0.6173 1.64e-32 1dux-a1-m1-cC_1dux-a1-m1-cF
20 1dux-a1-m1-cC 86 81 0.5376 0.5814 0.6173 1.64e-32 1dux-a1-m1-cC_1dux-a1-m1-cF
21 8i4z-a1-m1-cB 1687 28 0.1290 0.0071 0.4286 9.1 8i4z-a1-m1-cA_8i4z-a1-m1-cB
22 8i4z-a1-m1-cA 1687 28 0.1290 0.0071 0.4286 9.1 8i4z-a1-m1-cA_8i4z-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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