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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=52)
GQLDTHLADLYLLKYDTGLGVYESFICKYLEPRPLESETVSLRQLIVSVLPS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4ksn-a2-m1-cB 52 52 1.0000 1.0000 1.0000 2.68e-32 4ksn-a2-m1-cB_4ksn-a2-m1-cC, 4ksn-a2-m1-cB_4ksn-a2-m1-cD
2 4ksn-a1-m2-cB 52 52 1.0000 1.0000 1.0000 2.68e-32 4ksn-a1-m2-cB_4ksn-a1-m1-cD
3 4ksn-a1-m1-cB 52 52 1.0000 1.0000 1.0000 2.68e-32 4ksn-a1-m1-cB_4ksn-a1-m2-cD
4 4ksn-a2-m1-cD 61 59 1.0000 0.8525 0.8814 2.05e-29 4ksn-a2-m1-cB_4ksn-a2-m1-cD
5 4ksn-a1-m2-cD 61 59 1.0000 0.8525 0.8814 2.05e-29 4ksn-a1-m1-cB_4ksn-a1-m2-cD
6 4ksn-a1-m1-cD 61 59 1.0000 0.8525 0.8814 2.05e-29 4ksn-a1-m2-cB_4ksn-a1-m1-cD
7 4ksn-a2-m1-cC 63 63 0.9808 0.8095 0.8095 3.63e-28 4ksn-a2-m1-cB_4ksn-a2-m1-cC
8 4ksn-a1-m2-cA 64 64 0.9038 0.7344 0.7344 4.41e-24 4ksn-a1-m1-cA_4ksn-a1-m2-cA
9 4ksn-a1-m1-cA 64 64 0.9038 0.7344 0.7344 4.41e-24 4ksn-a1-m1-cA_4ksn-a1-m2-cA
10 5hok-a2-m3-cA 83 49 0.3269 0.2048 0.3469 0.88 5hok-a2-m3-cA_5hok-a2-m1-cD
11 5hok-a2-m1-cD 84 49 0.3269 0.2024 0.3469 0.92 5hok-a2-m3-cA_5hok-a2-m1-cD
12 3i1k-a2-m1-cC 362 20 0.1731 0.0249 0.4500 7.5 3i1k-a2-m1-cB_3i1k-a2-m1-cC
13 3i1k-a2-m1-cB 362 20 0.1731 0.0249 0.4500 7.5 3i1k-a2-m1-cB_3i1k-a2-m1-cC
14 3td7-a1-m2-cA 253 35 0.2308 0.0474 0.3429 8.6 3td7-a1-m1-cA_3td7-a1-m2-cA
15 3td7-a1-m1-cA 253 35 0.2308 0.0474 0.3429 8.6 3td7-a1-m1-cA_3td7-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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