Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=30)
GQLEQEIAALNQQIAALKQRSAALKWQIQG

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 7q1q-a1-m1-cB 30 30 1.0000 1.0000 1.0000 1.32e-13 7q1q-a1-m1-cA_7q1q-a1-m1-cB
2 7q1q-a1-m1-cA 30 30 1.0000 1.0000 1.0000 1.32e-13 7q1q-a1-m1-cA_7q1q-a1-m1-cB
3 7q1r-a1-m1-cB 30 30 0.9000 0.9000 0.9000 8.12e-12 7q1r-a1-m1-cA_7q1r-a1-m1-cB
4 7q1r-a1-m1-cA 30 30 0.9000 0.9000 0.9000 8.12e-12 7q1r-a1-m1-cA_7q1r-a1-m1-cB
5 6i1j-a2-m6-cA 30 23 0.4667 0.4667 0.6087 0.003 6i1j-a2-m1-cA_6i1j-a2-m6-cA, 6i1j-a2-m2-cA_6i1j-a2-m6-cA
6 6i1j-a2-m2-cA 30 23 0.4667 0.4667 0.6087 0.003 6i1j-a2-m2-cA_6i1j-a2-m6-cA
7 6i1j-a2-m1-cA 30 23 0.4667 0.4667 0.6087 0.003 6i1j-a2-m1-cA_6i1j-a2-m6-cA
8 7l33-a3-m7-cC 30 25 0.4667 0.4667 0.5600 0.003 7l33-a3-m4-cC_7l33-a3-m7-cC
9 7l33-a3-m7-cC 30 22 0.4000 0.4000 0.5455 6.5 7l33-a3-m4-cC_7l33-a3-m7-cC
10 7l33-a3-m4-cC 30 25 0.4667 0.4667 0.5600 0.003 7l33-a3-m4-cC_7l33-a3-m7-cC
11 7l33-a3-m4-cC 30 22 0.4000 0.4000 0.5455 6.5 7l33-a3-m4-cC_7l33-a3-m7-cC
12 4dzm-a2-m3-cB 30 20 0.5000 0.5000 0.7500 0.012 4dzm-a2-m1-cB_4dzm-a2-m3-cB
13 4dzm-a2-m3-cB 30 20 0.4000 0.4000 0.6000 4.4 4dzm-a2-m1-cB_4dzm-a2-m3-cB
14 4dzm-a2-m1-cB 30 20 0.5000 0.5000 0.7500 0.012 4dzm-a2-m1-cB_4dzm-a2-m3-cB
15 4dzm-a2-m1-cB 30 20 0.4000 0.4000 0.6000 4.4 4dzm-a2-m1-cB_4dzm-a2-m3-cB
16 4dzk-a1-m3-cA 29 23 0.4667 0.4828 0.6087 0.014 4dzk-a1-m2-cA_4dzk-a1-m3-cA
17 4dzk-a1-m3-cA 29 23 0.4000 0.4138 0.5217 4.6 4dzk-a1-m2-cA_4dzk-a1-m3-cA
18 4dzk-a1-m2-cA 29 23 0.4667 0.4828 0.6087 0.014 4dzk-a1-m2-cA_4dzk-a1-m3-cA
19 4dzk-a1-m2-cA 29 23 0.4000 0.4138 0.5217 4.6 4dzk-a1-m2-cA_4dzk-a1-m3-cA
20 4dzn-a1-m1-cB 31 20 0.5000 0.4839 0.7500 0.029 4dzn-a1-m1-cA_4dzn-a1-m1-cB
21 4dzn-a1-m1-cB 31 20 0.4333 0.4194 0.6500 0.19 4dzn-a1-m1-cA_4dzn-a1-m1-cB
22 4dzn-a1-m1-cA 31 20 0.5000 0.4839 0.7500 0.029 4dzn-a1-m1-cA_4dzn-a1-m1-cB
23 4dzn-a1-m1-cA 31 20 0.4333 0.4194 0.6500 0.19 4dzn-a1-m1-cA_4dzn-a1-m1-cB
24 4g1a-a1-m1-cB 24 23 0.4667 0.5833 0.6087 0.12 4g1a-a1-m1-cB_4g1a-a1-m1-cC
25 4g1a-a1-m1-cC 27 23 0.4667 0.5185 0.6087 0.14 4g1a-a1-m1-cB_4g1a-a1-m1-cC
26 4g1a-a1-m1-cC 27 21 0.4000 0.4444 0.5714 1.3 4g1a-a1-m1-cB_4g1a-a1-m1-cC
27 4g1a-a1-m1-cC 27 18 0.3667 0.4074 0.6111 2.5 4g1a-a1-m1-cB_4g1a-a1-m1-cC
28 7qdk-a1-m1-cC 29 23 0.4667 0.4828 0.6087 0.17 7qdk-a1-m1-cB_7qdk-a1-m1-cC
29 7qdk-a1-m1-cC 29 20 0.4333 0.4483 0.6500 1.1 7qdk-a1-m1-cB_7qdk-a1-m1-cC
30 7qdk-a1-m1-cB 29 23 0.4667 0.4828 0.6087 0.17 7qdk-a1-m1-cB_7qdk-a1-m1-cC
31 7qdk-a1-m1-cB 29 20 0.4333 0.4483 0.6500 1.1 7qdk-a1-m1-cB_7qdk-a1-m1-cC
32 5u59-a1-m2-cA 26 21 0.4333 0.5000 0.6190 1.2 5u59-a1-m1-cA_5u59-a1-m2-cA
33 5u59-a1-m2-cA 26 16 0.3667 0.4231 0.6875 1.8 5u59-a1-m1-cA_5u59-a1-m2-cA
34 5u59-a1-m1-cA 26 21 0.4333 0.5000 0.6190 1.2 5u59-a1-m1-cA_5u59-a1-m2-cA
35 5u59-a1-m1-cA 26 16 0.3667 0.4231 0.6875 1.8 5u59-a1-m1-cA_5u59-a1-m2-cA
36 6tgp-a1-m1-cB 88 22 0.4000 0.1364 0.5455 1.4 6tgp-a1-m1-cA_6tgp-a1-m1-cB
37 6tgp-a1-m1-cA 88 22 0.4000 0.1364 0.5455 1.4 6tgp-a1-m1-cA_6tgp-a1-m1-cB
38 7d2e-a1-m1-cD 63 26 0.3333 0.1587 0.3846 1.5 7d2e-a1-m1-cA_7d2e-a1-m1-cD, 7d2e-a1-m1-cC_7d2e-a1-m1-cD
39 7d2e-a1-m1-cA 62 17 0.3333 0.1613 0.5882 1.5 7d2e-a1-m1-cA_7d2e-a1-m1-cD, 7d2e-a1-m1-cC_7d2e-a1-m1-cA
40 7d2e-a1-m1-cC 59 17 0.3333 0.1695 0.5882 1.6 7d2e-a1-m1-cC_7d2e-a1-m1-cA, 7d2e-a1-m1-cC_7d2e-a1-m1-cD
41 1g6u-a2-m3-cB 48 26 0.3667 0.2292 0.4231 1.7 1g6u-a2-m1-cA_1g6u-a2-m3-cB, 1g6u-a2-m3-cA_1g6u-a2-m3-cB
42 1g6u-a2-m3-cB 48 23 0.4000 0.2500 0.5217 5.2 1g6u-a2-m1-cA_1g6u-a2-m3-cB, 1g6u-a2-m3-cA_1g6u-a2-m3-cB
43 1g6u-a2-m3-cA 48 26 0.3667 0.2292 0.4231 1.7 1g6u-a2-m3-cA_1g6u-a2-m3-cB
44 1g6u-a2-m3-cA 48 23 0.4000 0.2500 0.5217 5.2 1g6u-a2-m3-cA_1g6u-a2-m3-cB
45 1g6u-a2-m1-cA 48 26 0.3667 0.2292 0.4231 1.7 1g6u-a2-m1-cA_1g6u-a2-m3-cB
46 1g6u-a2-m1-cA 48 23 0.4000 0.2500 0.5217 5.2 1g6u-a2-m1-cA_1g6u-a2-m3-cB
47 3r4h-a2-m2-cF 28 20 0.3333 0.3571 0.5000 5.0 3r4h-a2-m1-cE_3r4h-a2-m2-cF, 3r4h-a2-m2-cE_3r4h-a2-m2-cF
48 6xxz-a1-m2-cB 30 19 0.3000 0.3000 0.4737 5.6 6xxz-a1-m2-cA_6xxz-a1-m2-cB
49 6xxz-a1-m2-cA 30 19 0.3000 0.3000 0.4737 5.6 6xxz-a1-m2-cA_6xxz-a1-m2-cB
50 7nyw-a1-m1-cB 858 28 0.3667 0.0128 0.3929 5.7 7nyw-a1-m1-cA_7nyw-a1-m1-cB
51 5ed9-a1-m1-cB 72 25 0.4333 0.1806 0.5200 7.7 5ed9-a1-m1-cA_5ed9-a1-m1-cB
52 5ed9-a1-m1-cA 71 25 0.4333 0.1831 0.5200 7.7 5ed9-a1-m1-cA_5ed9-a1-m1-cB
53 2bwn-a2-m1-cD 397 21 0.4000 0.0302 0.5714 9.3 2bwn-a2-m1-cD_2bwn-a2-m1-cE
54 2bwn-a2-m1-cE 398 21 0.4000 0.0302 0.5714 9.8 2bwn-a2-m1-cD_2bwn-a2-m1-cE

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600