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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
GQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYVVLLRNTSVTQMVYKHAISTI
VPARSVNL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7og8-a1-m6-cA 68 68 1.0000 1.0000 1.0000 1.64e-45 7og8-a1-m2-cA_7og8-a1-m6-cA
2 7og8-a1-m2-cA 68 68 1.0000 1.0000 1.0000 1.64e-45 7og8-a1-m2-cA_7og8-a1-m6-cA
3 1hk9-a1-m1-cA 64 64 0.7647 0.8125 0.8125 5.51e-34 1hk9-a1-m1-cB_1hk9-a1-m1-cA
4 1hk9-a1-m1-cB 63 63 0.7647 0.8254 0.8254 8.42e-34 1hk9-a1-m1-cB_1hk9-a1-m1-cA
5 6xyj-a1-m1-cCCC 79 77 0.7647 0.6582 0.6753 6.49e-32 6xyj-a1-m1-cCCC_6xyj-a1-m1-cDDD
6 6xyj-a1-m1-cDDD 80 77 0.7647 0.6500 0.6753 8.31e-32 6xyj-a1-m1-cCCC_6xyj-a1-m1-cDDD
7 3ahu-a1-m1-cC 66 65 0.4706 0.4848 0.4923 2.82e-20 3ahu-a1-m1-cA_3ahu-a1-m1-cC
8 3ahu-a1-m1-cA 66 65 0.4706 0.4848 0.4923 2.82e-20 3ahu-a1-m1-cA_3ahu-a1-m1-cC
9 3hfn-a1-m3-cB 60 54 0.2647 0.3000 0.3333 0.084 3hfn-a1-m3-cA_3hfn-a1-m3-cB
10 3hfn-a1-m3-cA 60 54 0.2647 0.3000 0.3333 0.084 3hfn-a1-m3-cA_3hfn-a1-m3-cB
11 2fsi-a1-m1-cA 691 55 0.2794 0.0275 0.3455 1.5 2fsi-a1-m1-cA_2fsi-a1-m1-cB
12 2fsi-a1-m1-cB 748 55 0.2794 0.0254 0.3455 1.8 2fsi-a1-m1-cA_2fsi-a1-m1-cB
13 5iqq-a1-m1-cC 83 32 0.1912 0.1566 0.4062 3.2 5iqq-a1-m1-cD_5iqq-a1-m1-cC
14 5iqq-a1-m1-cD 81 32 0.1912 0.1605 0.4062 3.4 5iqq-a1-m1-cD_5iqq-a1-m1-cC
15 4rgy-a1-m2-cB 236 52 0.1912 0.0551 0.2500 9.5 4rgy-a1-m1-cB_4rgy-a1-m2-cB, 4rgy-a1-m2-cB_4rgy-a1-m1-cA, 4rgy-a1-m2-cB_4rgy-a1-m2-cA
16 4rgy-a1-m1-cB 236 52 0.1912 0.0551 0.2500 9.5 4rgy-a1-m1-cB_4rgy-a1-m2-cB
17 4rgy-a1-m2-cA 237 52 0.1912 0.0549 0.2500 9.5 4rgy-a1-m2-cB_4rgy-a1-m2-cA
18 4rgy-a1-m1-cA 237 52 0.1912 0.0549 0.2500 9.5 4rgy-a1-m2-cB_4rgy-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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