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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=60)
GQRRSRTTFTAEQLEELERAFERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3cmy-a1-m2-cA 60 60 1.0000 1.0000 1.0000 8.11e-38 3cmy-a1-m1-cA_3cmy-a1-m2-cA
2 3cmy-a1-m1-cA 60 60 1.0000 1.0000 1.0000 8.11e-38 3cmy-a1-m1-cA_3cmy-a1-m2-cA
3 1fjl-a2-m2-cC 59 58 0.8167 0.8305 0.8448 9.54e-30 1fjl-a2-m1-cC_1fjl-a2-m2-cC
4 1fjl-a2-m1-cC 59 58 0.8167 0.8305 0.8448 9.54e-30 1fjl-a2-m1-cC_1fjl-a2-m2-cC
5 7dw5-a1-m1-cB 131 54 0.4833 0.2214 0.5370 7.48e-13 7dw5-a1-m1-cA_7dw5-a1-m1-cB
6 7dw5-a1-m1-cB 131 54 0.4667 0.2137 0.5185 1.42e-11 7dw5-a1-m1-cA_7dw5-a1-m1-cB
7 7dw5-a1-m1-cA 131 54 0.4833 0.2214 0.5370 7.48e-13 7dw5-a1-m1-cA_7dw5-a1-m1-cB
8 7dw5-a1-m1-cA 131 54 0.4667 0.2137 0.5185 1.42e-11 7dw5-a1-m1-cA_7dw5-a1-m1-cB
9 3a03-a2-m2-cA 53 52 0.3833 0.4340 0.4423 1.93e-08 3a03-a2-m1-cA_3a03-a2-m2-cA
10 3a03-a2-m1-cA 53 52 0.3833 0.4340 0.4423 1.93e-08 3a03-a2-m1-cA_3a03-a2-m2-cA
11 3d1n-a1-m1-cK 146 55 0.3667 0.1507 0.4000 2.83e-04 3d1n-a1-m1-cL_3d1n-a1-m1-cK
12 3d1n-a1-m1-cL 141 55 0.3667 0.1560 0.4000 2.89e-04 3d1n-a1-m1-cL_3d1n-a1-m1-cK
13 3nau-a1-m1-cB 56 50 0.2333 0.2500 0.2800 0.036 3nau-a1-m1-cA_3nau-a1-m1-cB
14 3nau-a1-m1-cA 56 50 0.2333 0.2500 0.2800 0.036 3nau-a1-m1-cA_3nau-a1-m1-cB
15 1au7-a1-m1-cA 130 56 0.3000 0.1385 0.3214 0.056 1au7-a1-m1-cB_1au7-a1-m1-cA
16 1au7-a1-m1-cB 128 51 0.3000 0.1406 0.3529 0.065 1au7-a1-m1-cB_1au7-a1-m1-cA
17 3l1p-a1-m1-cA 147 43 0.2333 0.0952 0.3256 0.088 3l1p-a1-m1-cB_3l1p-a1-m1-cA
18 3l1p-a1-m1-cB 145 43 0.2333 0.0966 0.3256 0.10 3l1p-a1-m1-cB_3l1p-a1-m1-cA
19 1hf0-a1-m1-cB 128 56 0.2500 0.1172 0.2679 0.44 1hf0-a1-m1-cA_1hf0-a1-m1-cB
20 1hf0-a1-m1-cA 128 56 0.2500 0.1172 0.2679 0.44 1hf0-a1-m1-cA_1hf0-a1-m1-cB
21 2mg4-a1-m1-cB 66 51 0.3167 0.2879 0.3725 0.49 2mg4-a1-m1-cA_2mg4-a1-m1-cB
22 2mg4-a1-m1-cA 66 51 0.3167 0.2879 0.3725 0.49 2mg4-a1-m1-cA_2mg4-a1-m1-cB
23 1e3o-a1-m2-cC 132 40 0.2000 0.0909 0.3000 0.75 1e3o-a1-m1-cC_1e3o-a1-m2-cC
24 1e3o-a1-m1-cC 132 40 0.2000 0.0909 0.3000 0.75 1e3o-a1-m1-cC_1e3o-a1-m2-cC
25 3k2a-a3-m4-cA 53 34 0.2500 0.2830 0.4412 1.7 3k2a-a3-m4-cA_3k2a-a3-m8-cB
26 3k2a-a3-m8-cB 54 34 0.2500 0.2778 0.4412 1.8 3k2a-a3-m4-cA_3k2a-a3-m8-cB, 3k2a-a3-m4-cB_3k2a-a3-m8-cB
27 3k2a-a3-m4-cB 54 34 0.2500 0.2778 0.4412 1.8 3k2a-a3-m4-cB_3k2a-a3-m8-cB
28 4dna-a1-m1-cB 450 28 0.1667 0.0222 0.3571 2.7 4dna-a1-m1-cA_4dna-a1-m1-cB
29 4dna-a1-m1-cA 450 28 0.1667 0.0222 0.3571 2.7 4dna-a1-m1-cA_4dna-a1-m1-cB
30 6lg1-a1-m1-cA 429 53 0.2833 0.0396 0.3208 5.2 6lg1-a1-m1-cB_6lg1-a1-m1-cA
31 6lg1-a1-m1-cB 425 53 0.2833 0.0400 0.3208 5.9 6lg1-a1-m1-cB_6lg1-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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