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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
GQTKVINFNDKFSLFNQHWSPRVIAENDYQFKLVKVEGEFVWHEHADTDEVFIVEGTLQI
AFRDQNITLQAGEYVIPKGVEHKPAKEECKIIIEPR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3d82-a2-m2-cA 96 96 1.0000 1.0000 1.0000 3.62e-68 3d82-a2-m1-cA_3d82-a2-m2-cA
2 3d82-a2-m1-cA 96 96 1.0000 1.0000 1.0000 3.62e-68 3d82-a2-m1-cA_3d82-a2-m2-cA
3 2i45-a3-m1-cF 96 92 0.3438 0.3438 0.3587 8.21e-17 2i45-a3-m1-cE_2i45-a3-m1-cF
4 2i45-a3-m1-cE 94 91 0.3229 0.3298 0.3407 2.24e-16 2i45-a3-m1-cE_2i45-a3-m1-cF
5 4e2g-a4-m1-cH 109 41 0.1562 0.1376 0.3659 0.002 4e2g-a4-m1-cG_4e2g-a4-m1-cH
6 4e2g-a4-m1-cG 109 41 0.1562 0.1376 0.3659 0.002 4e2g-a4-m1-cG_4e2g-a4-m1-cH
7 3lwc-a1-m2-cA 99 31 0.1250 0.1212 0.3871 0.13 3lwc-a1-m1-cA_3lwc-a1-m2-cA
8 3lwc-a1-m1-cA 99 31 0.1250 0.1212 0.3871 0.13 3lwc-a1-m1-cA_3lwc-a1-m2-cA
9 1yll-a1-m1-cD 193 51 0.1562 0.0777 0.2941 0.86 1yll-a1-m1-cC_1yll-a1-m1-cD
10 1yll-a1-m1-cC 192 51 0.1562 0.0781 0.2941 0.91 1yll-a1-m1-cC_1yll-a1-m1-cD
11 3wmu-a1-m1-cA 151 56 0.1667 0.1060 0.2857 1.5 3wmu-a1-m1-cA_3wmu-a1-m1-cB
12 3wmu-a1-m1-cB 153 56 0.1667 0.1046 0.2857 1.5 3wmu-a1-m1-cA_3wmu-a1-m1-cB
13 4axo-a1-m1-cA 126 44 0.1458 0.1111 0.3182 2.9 4axo-a1-m1-cA_4axo-a1-m1-cB
14 4axo-a1-m1-cB 137 44 0.1458 0.1022 0.3182 2.9 4axo-a1-m1-cA_4axo-a1-m1-cB
15 3ht1-a1-m2-cA 142 52 0.1562 0.1056 0.2885 4.5 3ht1-a1-m1-cA_3ht1-a1-m2-cA
16 3ht1-a1-m1-cA 142 52 0.1562 0.1056 0.2885 4.5 3ht1-a1-m1-cA_3ht1-a1-m2-cA
17 6zw0-a1-m1-cB 299 70 0.2188 0.0702 0.3000 5.1 6zw0-a1-m1-cA_6zw0-a1-m1-cB
18 6zw0-a1-m1-cA 299 70 0.2188 0.0702 0.3000 5.1 6zw0-a1-m1-cA_6zw0-a1-m1-cB
19 4c2k-a2-m1-cC 394 36 0.1146 0.0279 0.3056 8.0 4c2k-a2-m1-cC_4c2k-a2-m1-cD
20 4c2k-a2-m1-cD 399 36 0.1146 0.0276 0.3056 8.1 4c2k-a2-m1-cC_4c2k-a2-m1-cD
21 7nfc-a1-m1-cF 3557 26 0.1146 0.0031 0.4231 8.2 7nfc-a1-m1-cF_7nfc-a1-m1-cA
22 7nfc-a1-m1-cA 3562 26 0.1146 0.0031 0.4231 8.2 7nfc-a1-m1-cF_7nfc-a1-m1-cA
23 1sq4-a3-m4-cB 255 33 0.1146 0.0431 0.3333 8.8 1sq4-a3-m2-cB_1sq4-a3-m4-cB
24 1sq4-a3-m2-cB 255 33 0.1146 0.0431 0.3333 8.8 1sq4-a3-m2-cB_1sq4-a3-m4-cB
25 1sq4-a1-m4-cB 255 33 0.1146 0.0431 0.3333 8.8 1sq4-a1-m4-cB_1sq4-a1-m4-cA
26 1sq4-a1-m4-cA 258 33 0.1146 0.0426 0.3333 8.9 1sq4-a1-m4-cB_1sq4-a1-m4-cA
27 6k6t-a1-m1-cD 237 66 0.2083 0.0844 0.3030 9.8 6k6t-a1-m1-cA_6k6t-a1-m1-cD
28 6k6t-a1-m1-cA 237 66 0.2083 0.0844 0.3030 9.8 6k6t-a1-m1-cA_6k6t-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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