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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
GRFVVWPSELDSRLSRKYGRIVPRSIAVESPRVEEIVRAAEELKFKVIRVEEDKLLRTFG
MIVLESPYGKSKSLKLIAQKIREFRRR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3dlu-a1-m1-cD 87 87 1.0000 1.0000 1.0000 5.22e-56 3dlu-a1-m1-cD_3dlu-a1-m1-cA, 3dlu-a1-m1-cD_3dlu-a1-m1-cC
2 3dlu-a1-m1-cC 88 88 1.0000 0.9886 0.9886 2.46e-54 3dlu-a1-m1-cD_3dlu-a1-m1-cC
3 3dlu-a1-m1-cA 95 90 1.0000 0.9158 0.9667 5.20e-54 3dlu-a1-m1-cD_3dlu-a1-m1-cA
4 5mr3-a2-m1-cH 111 72 0.2414 0.1892 0.2917 0.39 5mr3-a2-m1-cF_5mr3-a2-m1-cH
5 4ju5-a1-m1-cA 200 74 0.2069 0.0900 0.2432 1.8 4ju5-a1-m1-cB_4ju5-a1-m1-cA
6 3t3o-a1-m2-cA 553 65 0.2414 0.0380 0.3231 4.0 3t3o-a1-m1-cA_3t3o-a1-m2-cA
7 3t3o-a1-m1-cA 553 65 0.2414 0.0380 0.3231 4.0 3t3o-a1-m1-cA_3t3o-a1-m2-cA
8 6fjw-a1-m2-cA 231 34 0.1264 0.0476 0.3235 4.2 6fjw-a1-m1-cA_6fjw-a1-m2-cA
9 6fjw-a1-m1-cA 231 34 0.1264 0.0476 0.3235 4.2 6fjw-a1-m1-cA_6fjw-a1-m2-cA
10 4rpa-a2-m2-cB 306 24 0.1264 0.0359 0.4583 8.0 4rpa-a2-m1-cA_4rpa-a2-m2-cB, 4rpa-a2-m2-cA_4rpa-a2-m2-cB
11 4rpa-a2-m2-cA 306 24 0.1264 0.0359 0.4583 8.0 4rpa-a2-m2-cA_4rpa-a2-m2-cB
12 4rpa-a2-m1-cA 306 24 0.1264 0.0359 0.4583 8.0 4rpa-a2-m1-cA_4rpa-a2-m2-cB
13 4ipi-a1-m2-cA 351 76 0.1839 0.0456 0.2105 8.7 4ipi-a1-m1-cA_4ipi-a1-m2-cA
14 4ipi-a1-m1-cA 351 76 0.1839 0.0456 0.2105 8.7 4ipi-a1-m1-cA_4ipi-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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