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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=53)
GSARERDTSRRLLAEKEREAERARQQQLDEYQELLDIKLALDEIHAYRKLLEG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2xv5-a1-m1-cB 53 53 1.0000 1.0000 1.0000 2.53e-30 2xv5-a1-m1-cA_2xv5-a1-m1-cB
2 2xv5-a1-m1-cA 53 53 1.0000 1.0000 1.0000 2.53e-30 2xv5-a1-m1-cA_2xv5-a1-m1-cB
3 3v4q-a2-m2-cA 74 55 0.8679 0.6216 0.8364 2.08e-20 3v4q-a2-m1-cA_3v4q-a2-m2-cA
4 3v4q-a2-m1-cA 74 55 0.8679 0.6216 0.8364 2.08e-20 3v4q-a2-m1-cA_3v4q-a2-m2-cA
5 3tyy-a1-m1-cB 71 55 0.6604 0.4930 0.6364 5.59e-15 3tyy-a1-m1-cB_3tyy-a1-m1-cA
6 3tyy-a1-m1-cA 75 55 0.6604 0.4667 0.6364 7.44e-15 3tyy-a1-m1-cB_3tyy-a1-m1-cA
7 1gk4-a3-m1-cF 74 54 0.5283 0.3784 0.5185 2.31e-05 1gk4-a3-m1-cE_1gk4-a3-m1-cF
8 1gk4-a3-m1-cE 70 54 0.5283 0.4000 0.5185 2.35e-05 1gk4-a3-m1-cE_1gk4-a3-m1-cF
9 4zry-a1-m2-cA 110 28 0.3396 0.1636 0.6429 7.41e-04 4zry-a1-m1-cA_4zry-a1-m2-cA
10 4zry-a1-m1-cA 110 28 0.3396 0.1636 0.6429 7.41e-04 4zry-a1-m1-cA_4zry-a1-m2-cA
11 1gk6-a1-m1-cB 52 36 0.3774 0.3846 0.5556 0.007 1gk6-a1-m1-cB_1gk6-a1-m1-cA
12 1gk6-a1-m1-cA 55 36 0.3774 0.3636 0.5556 0.007 1gk6-a1-m1-cB_1gk6-a1-m1-cA
13 3tnu-a1-m2-cA 90 29 0.3208 0.1889 0.5862 0.035 3tnu-a1-m1-cA_3tnu-a1-m2-cA
14 3tnu-a1-m1-cA 90 29 0.3208 0.1889 0.5862 0.035 3tnu-a1-m1-cA_3tnu-a1-m2-cA
15 1qh8-a1-m1-cD 519 24 0.2075 0.0212 0.4583 5.4 1qh8-a1-m1-cB_1qh8-a1-m1-cD
16 1qh8-a1-m1-cB 519 24 0.2075 0.0212 0.4583 5.4 1qh8-a1-m1-cB_1qh8-a1-m1-cD
17 5zm8-a1-m4-cA 386 20 0.1887 0.0259 0.5000 6.0 5zm8-a1-m1-cA_5zm8-a1-m4-cA, 5zm8-a1-m2-cA_5zm8-a1-m4-cA, 5zm8-a1-m3-cA_5zm8-a1-m4-cA
18 5zm8-a1-m3-cA 386 20 0.1887 0.0259 0.5000 6.0 5zm8-a1-m3-cA_5zm8-a1-m4-cA
19 5zm8-a1-m2-cA 386 20 0.1887 0.0259 0.5000 6.0 5zm8-a1-m2-cA_5zm8-a1-m4-cA
20 5zm8-a1-m1-cA 386 20 0.1887 0.0259 0.5000 6.0 5zm8-a1-m1-cA_5zm8-a1-m4-cA
21 1xpi-a3-m2-cB 229 26 0.2453 0.0568 0.5000 6.1 1xpi-a3-m1-cA_1xpi-a3-m2-cB, 1xpi-a3-m1-cB_1xpi-a3-m2-cB, 1xpi-a3-m2-cA_1xpi-a3-m2-cB
22 1xpi-a3-m1-cB 229 26 0.2453 0.0568 0.5000 6.1 1xpi-a3-m1-cB_1xpi-a3-m2-cB
23 1xpi-a3-m2-cA 229 26 0.2453 0.0568 0.5000 6.2 1xpi-a3-m2-cA_1xpi-a3-m2-cB
24 1xpi-a3-m1-cA 229 26 0.2453 0.0568 0.5000 6.2 1xpi-a3-m1-cA_1xpi-a3-m2-cB
25 4p5b-a1-m1-cD 235 23 0.2075 0.0468 0.4783 9.3 4p5b-a1-m1-cA_4p5b-a1-m1-cD
26 4p5b-a1-m1-cB 235 23 0.2075 0.0468 0.4783 9.3 4p5b-a1-m1-cA_4p5b-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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