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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
GSDPAVTYYRLEEVAKRNTSEETWMVLHGRVYDLTRFLSEHPGGEEVLREQAGADATESF
EDVGHSPDAREMSKQYYIGDVHPNDLKP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1lj0-a2-m1-cB 89 88 1.0000 0.9888 1.0000 1.77e-62 1lj0-a2-m1-cC_1lj0-a2-m1-cB
2 1lj0-a1-m1-cB 89 88 1.0000 0.9888 1.0000 1.77e-62 1lj0-a1-m1-cA_1lj0-a1-m1-cB
3 1lj0-a1-m1-cA 89 88 1.0000 0.9888 1.0000 1.77e-62 1lj0-a1-m1-cA_1lj0-a1-m1-cB
4 1lj0-a2-m1-cC 88 88 1.0000 1.0000 1.0000 1.91e-62 1lj0-a2-m1-cC_1lj0-a2-m1-cB
5 1icc-a5-m1-cB 87 86 0.9545 0.9655 0.9767 1.07e-59 1icc-a5-m2-cC_1icc-a5-m1-cB
6 1icc-a5-m2-cC 83 83 0.9205 0.9759 0.9759 3.06e-57 1icc-a5-m2-cC_1icc-a5-m1-cB
7 3lf5-a1-m1-cB 87 78 0.3068 0.3103 0.3462 2.60e-11 3lf5-a1-m1-cA_3lf5-a1-m1-cB
8 3lf5-a1-m1-cA 87 78 0.3068 0.3103 0.3462 2.60e-11 3lf5-a1-m1-cA_3lf5-a1-m1-cB
9 2ibp-a1-m1-cB 407 64 0.2159 0.0467 0.2969 0.048 2ibp-a1-m1-cA_2ibp-a1-m1-cB
10 2ibp-a1-m1-cA 407 64 0.2159 0.0467 0.2969 0.048 2ibp-a1-m1-cA_2ibp-a1-m1-cB
11 3ez1-a1-m1-cA 412 22 0.1250 0.0267 0.5000 7.5 3ez1-a1-m1-cA_3ez1-a1-m1-cB
12 3ez1-a1-m1-cB 413 22 0.1250 0.0266 0.5000 7.9 3ez1-a1-m1-cA_3ez1-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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