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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
GSDPGPEAARLRFRCFHYEEATGPQEALAQLRELCRQWLRPEVRSKEQMLELLVLEQFLG
ALPPEIQARVQGQRPGSPEEAAALVDGLRREPGG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2fi2-a1-m1-cB 94 94 1.0000 1.0000 1.0000 3.93e-62 2fi2-a1-m1-cA_2fi2-a1-m1-cB
2 2fi2-a1-m1-cA 94 94 1.0000 1.0000 1.0000 3.93e-62 2fi2-a1-m1-cA_2fi2-a1-m1-cB
3 1y7q-a1-m1-cB 98 87 0.5426 0.5204 0.5862 7.54e-30 1y7q-a1-m1-cA_1y7q-a1-m1-cB
4 1y7q-a1-m1-cA 98 87 0.5426 0.5204 0.5862 7.54e-30 1y7q-a1-m1-cA_1y7q-a1-m1-cB
5 3lhr-a1-m1-cB 93 88 0.5000 0.5054 0.5341 9.85e-28 3lhr-a1-m1-cA_3lhr-a1-m1-cB
6 3lhr-a1-m1-cA 92 88 0.5000 0.5109 0.5341 1.03e-27 3lhr-a1-m1-cA_3lhr-a1-m1-cB
7 4e6s-a1-m2-cA 85 81 0.4574 0.5059 0.5309 3.16e-24 4e6s-a1-m1-cA_4e6s-a1-m2-cA
8 4e6s-a1-m1-cA 85 81 0.4574 0.5059 0.5309 3.16e-24 4e6s-a1-m1-cA_4e6s-a1-m2-cA
9 3u80-a1-m1-cB 123 38 0.1383 0.1057 0.3421 3.7 3u80-a1-m1-cB_3u80-a1-m1-cA
10 6oxm-a1-m1-cB 404 37 0.1702 0.0396 0.4324 6.6 6oxm-a1-m1-cA_6oxm-a1-m1-cB
11 6oxm-a1-m1-cA 404 37 0.1702 0.0396 0.4324 6.6 6oxm-a1-m1-cA_6oxm-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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