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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
GSDPQVLRGSGHCKWFNVRMGFGFISMTSREGSPLENPVDVFVHQSKLYMEGFRSLKEGE
PVEFTFKSSKGFESLRVTGPGGNPCLGNE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ulj-a3-m2-cB 89 89 1.0000 1.0000 1.0000 8.12e-62 3ulj-a3-m1-cA_3ulj-a3-m2-cB, 3ulj-a3-m2-cA_3ulj-a3-m2-cB
2 3ulj-a3-m2-cA 87 87 0.9663 0.9885 0.9885 8.84e-58 3ulj-a3-m2-cA_3ulj-a3-m2-cB
3 3ulj-a3-m1-cA 87 87 0.9663 0.9885 0.9885 8.84e-58 3ulj-a3-m1-cA_3ulj-a3-m2-cB
4 4alp-a1-m2-cB 86 86 0.9551 0.9884 0.9884 6.76e-57 4alp-a1-m4-cD_4alp-a1-m2-cB
5 4alp-a1-m4-cD 84 84 0.9326 0.9881 0.9881 3.07e-55 4alp-a1-m4-cD_4alp-a1-m2-cB
6 7f3i-a1-m1-cA 93 82 0.3933 0.3763 0.4268 1.18e-12 7f3i-a1-m1-cE_7f3i-a1-m1-cA
7 7f3i-a1-m1-cE 91 82 0.3933 0.3846 0.4268 1.48e-12 7f3i-a1-m1-cE_7f3i-a1-m1-cA
8 3i2z-a1-m1-cB 67 70 0.3258 0.4328 0.4143 1.50e-09 3i2z-a1-m1-cB_3i2z-a1-m1-cA
9 3i2z-a1-m1-cA 71 70 0.3258 0.4085 0.4143 1.76e-09 3i2z-a1-m1-cB_3i2z-a1-m1-cA
10 2i5m-a2-m2-cX 66 70 0.3034 0.4091 0.3857 2.06e-08 2i5m-a2-m1-cX_2i5m-a2-m2-cX
11 2i5m-a2-m1-cX 66 70 0.3034 0.4091 0.3857 2.06e-08 2i5m-a2-m1-cX_2i5m-a2-m2-cX
12 1hzb-a1-m1-cB 66 54 0.2584 0.3485 0.4259 2.78e-07 1hzb-a1-m1-cA_1hzb-a1-m1-cB
13 1hzb-a1-m1-cA 66 54 0.2584 0.3485 0.4259 2.78e-07 1hzb-a1-m1-cA_1hzb-a1-m1-cB
14 2hax-a1-m1-cB 66 54 0.2584 0.3485 0.4259 2.81e-07 2hax-a1-m1-cA_2hax-a1-m1-cB
15 2hax-a1-m1-cA 66 54 0.2584 0.3485 0.4259 2.81e-07 2hax-a1-m1-cA_2hax-a1-m1-cB
16 1c9o-a1-m1-cB 66 54 0.2584 0.3485 0.4259 2.81e-07 1c9o-a1-m1-cA_1c9o-a1-m1-cB
17 1c9o-a1-m1-cA 66 54 0.2584 0.3485 0.4259 2.81e-07 1c9o-a1-m1-cA_1c9o-a1-m1-cB
18 3cam-a1-m1-cB 65 56 0.2809 0.3846 0.4464 5.33e-07 3cam-a1-m1-cA_3cam-a1-m1-cB
19 3cam-a1-m1-cA 65 56 0.2809 0.3846 0.4464 5.33e-07 3cam-a1-m1-cA_3cam-a1-m1-cB
20 5jx4-a1-m1-cB 66 54 0.2472 0.3333 0.4074 1.93e-05 5jx4-a1-m1-cA_5jx4-a1-m1-cB
21 5jx4-a1-m1-cA 65 54 0.2472 0.3385 0.4074 2.10e-05 5jx4-a1-m1-cA_5jx4-a1-m1-cB
22 2bh8-a1-m2-cB 86 37 0.1910 0.1977 0.4595 0.016 2bh8-a1-m1-cA_2bh8-a1-m2-cB, 2bh8-a1-m1-cB_2bh8-a1-m2-cB, 2bh8-a1-m2-cA_2bh8-a1-m2-cB
23 2bh8-a1-m1-cB 86 37 0.1910 0.1977 0.4595 0.016 2bh8-a1-m1-cB_2bh8-a1-m2-cB
24 2bh8-a1-m2-cA 85 37 0.1910 0.2000 0.4595 0.017 2bh8-a1-m2-cA_2bh8-a1-m2-cB
25 2bh8-a1-m1-cA 85 37 0.1910 0.2000 0.4595 0.017 2bh8-a1-m1-cA_2bh8-a1-m2-cB
26 4cw4-a1-m2-cA 639 37 0.1461 0.0203 0.3514 1.2 4cw4-a1-m1-cA_4cw4-a1-m2-cA
27 4cw4-a1-m1-cA 639 37 0.1461 0.0203 0.3514 1.2 4cw4-a1-m1-cA_4cw4-a1-m2-cA
28 3idf-a1-m1-cA 138 36 0.1461 0.0942 0.3611 1.7 3idf-a1-m1-cB_3idf-a1-m1-cA
29 3idf-a1-m1-cB 135 36 0.1461 0.0963 0.3611 1.8 3idf-a1-m1-cB_3idf-a1-m1-cA
30 1ykd-a1-m1-cA 383 40 0.1236 0.0287 0.2750 8.3 1ykd-a1-m1-cB_1ykd-a1-m1-cA
31 1ykd-a1-m1-cB 380 40 0.1236 0.0289 0.2750 8.4 1ykd-a1-m1-cB_1ykd-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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