Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=75)
GSEYEIRKALEELKASTAELKRATASLRAITEELKKNPSEDALVEHNRAIVEHNAIIVEN
NRIIAAVLELIVRAI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6msq-a1-m4-cA 75 75 1.0000 1.0000 1.0000 6.74e-46 6msq-a1-m2-cA_6msq-a1-m4-cA
2 6msq-a1-m2-cA 75 75 1.0000 1.0000 1.0000 6.74e-46 6msq-a1-m2-cA_6msq-a1-m4-cA
3 5j0i-a1-m3-cA 73 70 0.5067 0.5205 0.5429 5.31e-16 5j0i-a1-m2-cA_5j0i-a1-m3-cA
4 5j0i-a1-m2-cA 73 70 0.5067 0.5205 0.5429 5.31e-16 5j0i-a1-m2-cA_5j0i-a1-m3-cA
5 5j0h-a2-m5-cB 72 67 0.5333 0.5556 0.5970 1.36e-14 5j0h-a2-m3-cB_5j0h-a2-m5-cB
6 5j0h-a2-m3-cB 72 67 0.5333 0.5556 0.5970 1.36e-14 5j0h-a2-m3-cB_5j0h-a2-m5-cB
7 6n9h-a1-m3-cA 75 64 0.4000 0.4000 0.4688 1.93e-07 6n9h-a1-m2-cA_6n9h-a1-m3-cA
8 6n9h-a1-m2-cA 75 64 0.4000 0.4000 0.4688 1.93e-07 6n9h-a1-m2-cA_6n9h-a1-m3-cA
9 5j0j-a1-m1-cC 71 64 0.3333 0.3521 0.3906 1.31e-06 5j0j-a1-m1-cB_5j0j-a1-m1-cC
10 5j0j-a1-m1-cB 69 62 0.3333 0.3623 0.4032 1.87e-06 5j0j-a1-m1-cB_5j0j-a1-m1-cC
11 8fbj-a1-m3-cA 307 51 0.2400 0.0586 0.3529 0.93 8fbj-a1-m2-cA_8fbj-a1-m3-cA
12 8fbj-a1-m2-cA 307 51 0.2400 0.0586 0.3529 0.93 8fbj-a1-m2-cA_8fbj-a1-m3-cA
13 8fbo-a1-m1-cB 254 60 0.3333 0.0984 0.4167 1.5 8fbo-a1-m1-cA_8fbo-a1-m1-cB
14 8fbo-a1-m1-cA 254 60 0.3333 0.0984 0.4167 1.5 8fbo-a1-m1-cA_8fbo-a1-m1-cB
15 6xy0-a1-m1-cD 30 25 0.1733 0.4333 0.5200 3.6 6xy0-a1-m1-cA_6xy0-a1-m1-cD, 6xy0-a1-m1-cB_6xy0-a1-m1-cD
16 6xy0-a1-m1-cB 30 25 0.1733 0.4333 0.5200 3.6 6xy0-a1-m1-cB_6xy0-a1-m1-cD
17 6xy0-a1-m1-cA 30 25 0.1733 0.4333 0.5200 3.6 6xy0-a1-m1-cA_6xy0-a1-m1-cD
18 7k0n-a1-m1-cE 464 31 0.1467 0.0237 0.3548 4.3 7k0n-a1-m1-cA_7k0n-a1-m1-cE
19 7k0n-a1-m1-cA 464 31 0.1467 0.0237 0.3548 4.3 7k0n-a1-m1-cA_7k0n-a1-m1-cE
20 8fbk-a1-m3-cA 218 34 0.2000 0.0688 0.4412 6.0 8fbk-a1-m2-cA_8fbk-a1-m3-cA
21 8fbk-a1-m2-cA 218 34 0.2000 0.0688 0.4412 6.0 8fbk-a1-m2-cA_8fbk-a1-m3-cA
22 2i9i-a1-m2-cA 221 73 0.2933 0.0995 0.3014 6.2 2i9i-a1-m1-cA_2i9i-a1-m2-cA
23 2i9i-a1-m1-cA 221 73 0.2933 0.0995 0.3014 6.2 2i9i-a1-m1-cA_2i9i-a1-m2-cA
24 8fbi-a1-m3-cA 274 29 0.1733 0.0474 0.4483 6.2 8fbi-a1-m2-cA_8fbi-a1-m3-cA
25 8fbi-a1-m2-cA 274 29 0.1733 0.0474 0.4483 6.2 8fbi-a1-m2-cA_8fbi-a1-m3-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600