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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
GSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQGGGGSEWEREISNYTDIIYRLIEESQNQQ
EKNEQELLALDKWASLWNWFDI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3k9a-a1-m3-cA 82 82 1.0000 1.0000 1.0000 1.45e-53 3k9a-a1-m2-cA_3k9a-a1-m3-cA
2 3k9a-a1-m2-cA 82 82 1.0000 1.0000 1.0000 1.45e-53 3k9a-a1-m2-cA_3k9a-a1-m3-cA
3 3wfv-a1-m3-cA 86 77 0.7073 0.6744 0.7532 1.26e-32 3wfv-a1-m2-cA_3wfv-a1-m3-cA
4 3wfv-a1-m2-cA 86 77 0.7073 0.6744 0.7532 1.26e-32 3wfv-a1-m2-cA_3wfv-a1-m3-cA
5 3cp1-a1-m3-cA 73 67 0.6585 0.7397 0.8060 2.13e-29 3cp1-a1-m2-cA_3cp1-a1-m3-cA
6 3cp1-a1-m2-cA 73 67 0.6585 0.7397 0.8060 2.13e-29 3cp1-a1-m2-cA_3cp1-a1-m3-cA
7 5fyj-a1-m3-cB 154 120 0.7439 0.3961 0.5083 7.89e-25 5fyj-a1-m2-cB_5fyj-a1-m3-cB
8 5fyj-a1-m2-cB 154 120 0.7439 0.3961 0.5083 7.89e-25 5fyj-a1-m2-cB_5fyj-a1-m3-cB
9 7ska-a1-m1-cZ 142 116 0.6707 0.3873 0.4741 4.97e-22 7ska-a1-m1-cO_7ska-a1-m1-cZ
10 7ska-a1-m1-cO 142 116 0.6707 0.3873 0.4741 4.97e-22 7ska-a1-m1-cO_7ska-a1-m1-cZ
11 7n6w-a1-m1-cA 591 118 0.7073 0.0981 0.4915 2.66e-21 7n6w-a1-m1-cC_7n6w-a1-m1-cA
12 7n6w-a1-m1-cC 585 116 0.6951 0.0974 0.4914 5.80e-21 7n6w-a1-m1-cC_7n6w-a1-m1-cA
13 6nij-a1-m1-cB 140 119 0.6463 0.3786 0.4454 4.75e-17 6nij-a1-m1-cF_6nij-a1-m1-cB
14 6nij-a1-m1-cF 139 119 0.6341 0.3741 0.4370 3.18e-16 6nij-a1-m1-cF_6nij-a1-m1-cB
15 7ucg-a1-m1-cM 134 119 0.5976 0.3657 0.4118 1.28e-15 7ucg-a1-m1-cB_7ucg-a1-m1-cM
16 7ucg-a1-m1-cB 134 119 0.5976 0.3657 0.4118 1.28e-15 7ucg-a1-m1-cB_7ucg-a1-m1-cM
17 6ccb-a2-m5-cB 131 119 0.5976 0.3740 0.4118 1.60e-13 6ccb-a2-m3-cB_6ccb-a2-m5-cB
18 6ccb-a2-m3-cB 131 119 0.5976 0.3740 0.4118 1.60e-13 6ccb-a2-m3-cB_6ccb-a2-m5-cB
19 4kht-a2-m3-cA 66 30 0.3537 0.4394 0.9667 1.68e-13 4kht-a2-m2-cA_4kht-a2-m3-cA
20 4kht-a2-m2-cA 66 30 0.3537 0.4394 0.9667 1.68e-13 4kht-a2-m2-cA_4kht-a2-m3-cA
21 3vgy-a1-m3-cC 49 30 0.3537 0.5918 0.9667 3.12e-13 3vgy-a1-m1-cC_3vgy-a1-m3-cC
22 3vgy-a1-m1-cC 49 30 0.3537 0.5918 0.9667 3.12e-13 3vgy-a1-m1-cC_3vgy-a1-m3-cC
23 5cn0-a1-m3-cA 70 70 0.4512 0.5286 0.5286 3.37e-13 5cn0-a1-m2-cA_5cn0-a1-m3-cA
24 5cn0-a1-m2-cA 70 70 0.4512 0.5286 0.5286 3.37e-13 5cn0-a1-m2-cA_5cn0-a1-m3-cA
25 2kp8-a1-m1-cC 72 30 0.3537 0.4028 0.9667 3.91e-13 2kp8-a1-m1-cB_2kp8-a1-m1-cC
26 2kp8-a1-m1-cC 72 26 0.2561 0.2917 0.8077 1.01e-06 2kp8-a1-m1-cB_2kp8-a1-m1-cC
27 2kp8-a1-m1-cB 72 30 0.3537 0.4028 0.9667 3.91e-13 2kp8-a1-m1-cB_2kp8-a1-m1-cC
28 2kp8-a1-m1-cB 72 26 0.2561 0.2917 0.8077 1.01e-06 2kp8-a1-m1-cB_2kp8-a1-m1-cC
29 7rso-a1-m1-cF 124 34 0.3537 0.2339 0.8529 4.75e-13 7rso-a1-m1-cE_7rso-a1-m1-cF
30 7rso-a1-m1-cE 124 34 0.3537 0.2339 0.8529 4.75e-13 7rso-a1-m1-cE_7rso-a1-m1-cF
31 6vo3-a1-m1-cF 124 35 0.3537 0.2339 0.8286 5.29e-13 6vo3-a1-m1-cE_6vo3-a1-m1-cF
32 6vo3-a1-m1-cE 124 35 0.3537 0.2339 0.8286 5.29e-13 6vo3-a1-m1-cE_6vo3-a1-m1-cF
33 6mzj-a1-m1-cE 550 34 0.3293 0.0491 0.7941 3.16e-12 6mzj-a1-m1-cB_6mzj-a1-m1-cE
34 6mzj-a1-m1-cB 550 34 0.3293 0.0491 0.7941 3.16e-12 6mzj-a1-m1-cB_6mzj-a1-m1-cE
35 6dcq-a1-m1-cF 139 34 0.3049 0.1799 0.7353 6.05e-11 6dcq-a1-m1-cB_6dcq-a1-m1-cF
36 6p65-a1-m1-cE 557 33 0.2805 0.0413 0.6970 7.85e-11 6p65-a1-m1-cE_6p65-a1-m1-cB
37 6p65-a1-m1-cB 557 33 0.2805 0.0413 0.6970 7.85e-11 6p65-a1-m1-cE_6p65-a1-m1-cB
38 7mxd-a1-m1-cI 136 116 0.5488 0.3309 0.3879 1.19e-10 7mxd-a1-m1-cB_7mxd-a1-m1-cI
39 7mxd-a1-m1-cB 136 116 0.5488 0.3309 0.3879 1.19e-10 7mxd-a1-m1-cB_7mxd-a1-m1-cI
40 7ur6-a1-m1-cI 132 35 0.3171 0.1970 0.7429 1.19e-10 7ur6-a1-m1-cC_7ur6-a1-m1-cI
41 7ur6-a1-m1-cC 132 35 0.3171 0.1970 0.7429 1.19e-10 7ur6-a1-m1-cC_7ur6-a1-m1-cI
42 6wix-a1-m3-cB 120 103 0.4756 0.3250 0.3786 2.58e-10 6wix-a1-m2-cB_6wix-a1-m3-cB
43 6wix-a1-m2-cB 120 103 0.4756 0.3250 0.3786 2.58e-10 6wix-a1-m2-cB_6wix-a1-m3-cB
44 1jq0-a1-m3-cA 71 68 0.4512 0.5211 0.5441 4.33e-10 1jq0-a1-m2-cA_1jq0-a1-m3-cA
45 1jq0-a1-m2-cA 71 68 0.4512 0.5211 0.5441 4.33e-10 1jq0-a1-m2-cA_1jq0-a1-m3-cA
46 3p7k-a2-m3-cA 45 29 0.2927 0.5333 0.8276 6.73e-10 3p7k-a2-m2-cA_3p7k-a2-m3-cA
47 3p7k-a2-m2-cA 45 29 0.2927 0.5333 0.8276 6.73e-10 3p7k-a2-m2-cA_3p7k-a2-m3-cA
48 6ohy-a1-m1-cF 120 35 0.2683 0.1833 0.6286 9.46e-10 6ohy-a1-m1-cF_6ohy-a1-m1-cE
49 6ohy-a1-m1-cE 120 35 0.2683 0.1833 0.6286 9.46e-10 6ohy-a1-m1-cF_6ohy-a1-m1-cE
50 1jpx-a1-m3-cA 59 61 0.4024 0.5593 0.5410 3.97e-08 1jpx-a1-m2-cA_1jpx-a1-m3-cA
51 1jpx-a1-m2-cA 59 61 0.4024 0.5593 0.5410 3.97e-08 1jpx-a1-m2-cA_1jpx-a1-m3-cA
52 2zfc-a1-m1-cC 44 30 0.2439 0.4545 0.6667 6.24e-08 2zfc-a1-m1-cA_2zfc-a1-m1-cC
53 2zfc-a1-m1-cA 44 30 0.2439 0.4545 0.6667 6.24e-08 2zfc-a1-m1-cA_2zfc-a1-m1-cC
54 6nqd-a1-m1-cF 124 31 0.2561 0.1694 0.6774 2.52e-07 6nqd-a1-m1-cB_6nqd-a1-m1-cF
55 6nqd-a1-m1-cB 124 31 0.2561 0.1694 0.6774 2.52e-07 6nqd-a1-m1-cB_6nqd-a1-m1-cF
56 6dcq-a1-m1-cB 122 25 0.2317 0.1557 0.7600 5.14e-07 6dcq-a1-m1-cB_6dcq-a1-m1-cF
57 2m7w-a1-m1-cC 59 20 0.2195 0.3051 0.9000 4.69e-06 2m7w-a1-m1-cB_2m7w-a1-m1-cC
58 2m7w-a1-m1-cB 59 20 0.2195 0.3051 0.9000 4.69e-06 2m7w-a1-m1-cB_2m7w-a1-m1-cC
59 2lp7-a1-m1-cC 59 20 0.2195 0.3051 0.9000 4.69e-06 2lp7-a1-m1-cA_2lp7-a1-m1-cC
60 2lp7-a1-m1-cA 59 20 0.2195 0.3051 0.9000 4.69e-06 2lp7-a1-m1-cA_2lp7-a1-m1-cC
61 3g9r-a2-m1-cF 41 13 0.1463 0.2927 0.9231 0.017 3g9r-a2-m1-cD_3g9r-a2-m1-cF
62 3g9r-a2-m1-cD 41 13 0.1463 0.2927 0.9231 0.017 3g9r-a2-m1-cD_3g9r-a2-m1-cF
63 8dua-a1-m1-cF 91 35 0.2073 0.1868 0.4857 0.081 8dua-a1-m1-cB_8dua-a1-m1-cF
64 8dua-a1-m1-cB 91 35 0.2073 0.1868 0.4857 0.081 8dua-a1-m1-cB_8dua-a1-m1-cF
65 3qdk-a2-m1-cD 554 47 0.1707 0.0253 0.2979 4.8 3qdk-a2-m1-cC_3qdk-a2-m1-cD
66 3qdk-a2-m1-cC 549 47 0.1707 0.0255 0.2979 5.0 3qdk-a2-m1-cC_3qdk-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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