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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
GSGKISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVAT
RTALHGVKWPQSNPKFLCADYAEQDELDYHRGLLV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6g6s-a1-m1-cA 95 95 1.0000 1.0000 1.0000 1.65e-68 6g6s-a1-m1-cB_6g6s-a1-m1-cA
2 6g6s-a1-m1-cB 91 91 0.9579 1.0000 1.0000 9.48e-66 6g6s-a1-m1-cB_6g6s-a1-m1-cA
3 8i28-a1-m2-cB 335 53 0.2000 0.0567 0.3585 0.009 8i28-a1-m1-cA_8i28-a1-m2-cB
4 8i28-a1-m1-cA 335 53 0.2000 0.0567 0.3585 0.009 8i28-a1-m1-cA_8i28-a1-m2-cB
5 6gc5-a1-m1-cB 76 60 0.1895 0.2368 0.3000 0.17 6gc5-a1-m1-cB_6gc5-a1-m1-cA
6 5det-a1-m1-cB 94 72 0.1895 0.1915 0.2500 0.43 5det-a1-m1-cA_5det-a1-m1-cB
7 5det-a1-m1-cA 91 72 0.1895 0.1978 0.2500 0.48 5det-a1-m1-cA_5det-a1-m1-cB
8 3nnc-a2-m4-cA 175 64 0.1895 0.1029 0.2812 0.63 3nnc-a2-m2-cA_3nnc-a2-m4-cA, 3nnc-a2-m3-cA_3nnc-a2-m4-cA
9 3nnc-a2-m3-cA 175 64 0.1895 0.1029 0.2812 0.63 3nnc-a2-m3-cA_3nnc-a2-m4-cA
10 3nnc-a2-m2-cA 175 64 0.1895 0.1029 0.2812 0.63 3nnc-a2-m2-cA_3nnc-a2-m4-cA
11 6gd1-a1-m1-cA 190 71 0.2105 0.1053 0.2817 2.3 6gd1-a1-m1-cB_6gd1-a1-m1-cA
12 3k94-a1-m2-cB 206 28 0.1368 0.0631 0.4643 2.5 3k94-a1-m1-cA_3k94-a1-m2-cB
13 3k94-a1-m1-cA 205 28 0.1368 0.0634 0.4643 2.6 3k94-a1-m1-cA_3k94-a1-m2-cB
14 6gc5-a1-m1-cA 79 64 0.2000 0.2405 0.2969 2.8 6gc5-a1-m1-cB_6gc5-a1-m1-cA
15 6gd1-a1-m1-cB 187 64 0.2000 0.1016 0.2969 5.2 6gd1-a1-m1-cB_6gd1-a1-m1-cA
16 1wsp-a1-m1-cA 83 46 0.1684 0.1928 0.3478 5.7 1wsp-a1-m1-cA_1wsp-a1-m1-cB
17 1wsp-a1-m1-cC 84 46 0.1684 0.1905 0.3478 6.1 1wsp-a1-m1-cB_1wsp-a1-m1-cC
18 1wsp-a1-m1-cB 84 46 0.1684 0.1905 0.3478 6.1 1wsp-a1-m1-cA_1wsp-a1-m1-cB, 1wsp-a1-m1-cB_1wsp-a1-m1-cC
19 6nx5-a2-m1-cD 75 60 0.1368 0.1733 0.2167 6.2 6nx5-a2-m1-cC_6nx5-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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