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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=48)
GSGSPLAQQIKNIHSFIHQAKAAGRMDEVRTLQENLHQLMHEYFQQSD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3v1d-a4-m1-cH 48 48 1.0000 1.0000 1.0000 9.09e-31 3v1d-a4-m1-cE_3v1d-a4-m1-cH
2 3v1d-a4-m1-cE 48 48 1.0000 1.0000 1.0000 9.09e-31 3v1d-a4-m1-cE_3v1d-a4-m1-cH
3 3v1b-a1-m1-cB 48 48 1.0000 1.0000 1.0000 9.09e-31 3v1b-a1-m1-cA_3v1b-a1-m1-cB
4 3v1c-a1-m1-cB 47 47 0.9792 1.0000 1.0000 6.57e-30 3v1c-a1-m1-cA_3v1c-a1-m1-cB
5 3v1c-a1-m1-cA 46 46 0.9583 1.0000 1.0000 3.34e-29 3v1c-a1-m1-cA_3v1c-a1-m1-cB
6 3v1b-a1-m1-cA 46 46 0.9583 1.0000 1.0000 3.34e-29 3v1b-a1-m1-cA_3v1b-a1-m1-cB
7 7bww-a5-m1-cD 88 45 0.7917 0.4318 0.8444 4.85e-22 7bww-a5-m1-cC_7bww-a5-m1-cD, 7bww-a5-m1-cD_7bww-a5-m1-cA
8 7bww-a5-m1-cD 88 45 0.7708 0.4205 0.8222 5.15e-19 7bww-a5-m1-cC_7bww-a5-m1-cD, 7bww-a5-m1-cD_7bww-a5-m1-cA
9 7bww-a5-m1-cC 86 45 0.7917 0.4419 0.8444 4.85e-22 7bww-a5-m1-cC_7bww-a5-m1-cD
10 7bww-a5-m1-cC 86 43 0.7292 0.4070 0.8140 2.31e-17 7bww-a5-m1-cC_7bww-a5-m1-cD
11 7bww-a5-m1-cA 90 45 0.7917 0.4222 0.8444 5.28e-22 7bww-a5-m1-cD_7bww-a5-m1-cA
12 7bww-a5-m1-cA 90 45 0.7917 0.4222 0.8444 5.15e-20 7bww-a5-m1-cD_7bww-a5-m1-cA
13 5od9-a1-m1-cA 95 46 0.7708 0.3895 0.8043 1.99e-21 5od9-a1-m1-cB_5od9-a1-m1-cA
14 5od9-a1-m1-cA 95 46 0.7292 0.3684 0.7609 1.83e-18 5od9-a1-m1-cB_5od9-a1-m1-cA
15 5od9-a1-m1-cB 88 45 0.7500 0.4091 0.8000 1.99e-20 5od9-a1-m1-cB_5od9-a1-m1-cA
16 5od9-a1-m1-cB 88 43 0.6667 0.3636 0.7442 8.72e-16 5od9-a1-m1-cB_5od9-a1-m1-cA
17 7p9q-a1-m1-cF 452 29 0.2292 0.0243 0.3793 6.1 7p9q-a1-m1-cB_7p9q-a1-m1-cF, 7p9q-a1-m1-cD_7p9q-a1-m1-cF
18 7p9q-a1-m1-cD 452 29 0.2292 0.0243 0.3793 6.1 7p9q-a1-m1-cD_7p9q-a1-m1-cF
19 7p9q-a1-m1-cB 452 29 0.2292 0.0243 0.3793 6.1 7p9q-a1-m1-cB_7p9q-a1-m1-cF
20 3r2g-a2-m4-cA 323 28 0.1667 0.0248 0.2857 6.4 3r2g-a2-m2-cA_3r2g-a2-m4-cA
21 3r2g-a2-m2-cA 323 28 0.1667 0.0248 0.2857 6.4 3r2g-a2-m2-cA_3r2g-a2-m4-cA

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Reference:
Jacob Schwartz et al.

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