Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=92)
GSGTMLPVFCVVEHEHAEFVLVRKDMLFNQLIEMALLSLGYSHSSAAQAKGLIQVGKWNP
VPLSYVTDAPDATVADMLQDVYHVVTLKIQLH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4q2j-a1-m1-cC 92 92 1.0000 1.0000 1.0000 4.10e-65 4q2j-a1-m1-cC_4q2j-a1-m1-cA
2 3tuo-a1-m1-cC 93 91 0.9891 0.9785 1.0000 6.66e-64 3tuo-a1-m1-cD_3tuo-a1-m1-cC
3 4q2j-a1-m1-cB 94 93 1.0000 0.9787 0.9892 4.75e-63 4q2j-a1-m1-cB_4q2j-a1-m1-cD
4 3tuo-a1-m1-cD 91 91 0.9783 0.9890 0.9890 6.29e-63 3tuo-a1-m1-cD_3tuo-a1-m1-cA, 3tuo-a1-m1-cD_3tuo-a1-m1-cC
5 4q2j-a1-m1-cA 169 94 1.0000 0.5444 0.9787 2.58e-62 4q2j-a1-m1-cC_4q2j-a1-m1-cA
6 4q2j-a1-m1-cD 169 94 1.0000 0.5444 0.9787 2.67e-62 4q2j-a1-m1-cB_4q2j-a1-m1-cD
7 3tuo-a1-m1-cA 104 103 1.0000 0.8846 0.8932 1.66e-61 3tuo-a1-m1-cD_3tuo-a1-m1-cA
8 6r8f-a1-m1-cD 230 76 0.2065 0.0826 0.2500 1.3 6r8f-a1-m1-cB_6r8f-a1-m1-cD
9 6r8f-a1-m1-cB 230 76 0.2065 0.0826 0.2500 1.3 6r8f-a1-m1-cB_6r8f-a1-m1-cD
10 1w7c-a1-m2-cA 736 49 0.1848 0.0231 0.3469 6.1 1w7c-a1-m1-cA_1w7c-a1-m2-cA
11 1w7c-a1-m1-cA 736 49 0.1848 0.0231 0.3469 6.1 1w7c-a1-m1-cA_1w7c-a1-m2-cA
12 5xmj-a2-m1-cI 622 72 0.2500 0.0370 0.3194 6.3 5xmj-a2-m1-cE_5xmj-a2-m1-cI
13 5xmj-a2-m1-cE 622 72 0.2500 0.0370 0.3194 6.3 5xmj-a2-m1-cE_5xmj-a2-m1-cI
14 6l85-a1-m1-cB 401 49 0.1739 0.0399 0.3265 9.5 6l85-a1-m1-cA_6l85-a1-m1-cB
15 6l85-a1-m1-cA 400 49 0.1739 0.0400 0.3265 9.6 6l85-a1-m1-cA_6l85-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600