Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=83)
GSHMNDVLTRVLEVVKNFEKVDASKVTPESHFVKDLGLNALDVVEVVFAIEQEFILDIPD
HDAEKIQSIPDAVEYIAQNPMAK

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 5zwt-a1-m1-cB 83 83 1.0000 1.0000 1.0000 9.32e-56 5zwt-a1-m1-cA_5zwt-a1-m1-cB
2 5zwt-a1-m1-cA 83 83 1.0000 1.0000 1.0000 9.32e-56 5zwt-a1-m1-cA_5zwt-a1-m1-cB
3 2x2b-a1-m2-cA 76 77 0.4337 0.4737 0.4675 1.45e-15 2x2b-a1-m1-cA_2x2b-a1-m2-cA
4 2x2b-a1-m1-cA 76 77 0.4337 0.4737 0.4675 1.45e-15 2x2b-a1-m1-cA_2x2b-a1-m2-cA
5 3gzl-a1-m2-cA 81 59 0.3133 0.3210 0.4407 3.22e-13 3gzl-a1-m1-cA_3gzl-a1-m2-cA
6 3gzl-a1-m1-cA 81 59 0.3133 0.3210 0.4407 3.22e-13 3gzl-a1-m1-cA_3gzl-a1-m2-cA
7 2fae-a8-m5-cB 77 67 0.3494 0.3766 0.4328 5.05e-13 2fae-a8-m1-cA_2fae-a8-m5-cB
8 2fae-a8-m1-cA 77 67 0.3494 0.3766 0.4328 5.05e-13 2fae-a8-m1-cA_2fae-a8-m5-cB
9 2fae-a3-m4-cB 77 67 0.3494 0.3766 0.4328 5.05e-13 2fae-a3-m1-cA_2fae-a3-m4-cB
10 2fae-a3-m1-cA 77 67 0.3494 0.3766 0.4328 5.05e-13 2fae-a3-m1-cA_2fae-a3-m4-cB
11 2fad-a3-m2-cB 77 67 0.3494 0.3766 0.4328 5.05e-13 2fad-a3-m1-cA_2fad-a3-m2-cB
12 2fad-a3-m1-cA 77 67 0.3494 0.3766 0.4328 5.05e-13 2fad-a3-m1-cA_2fad-a3-m2-cB
13 3lmo-a1-m2-cA 94 50 0.2048 0.1809 0.3400 1.64e-06 3lmo-a1-m1-cA_3lmo-a1-m2-cA
14 3lmo-a1-m1-cA 94 50 0.2048 0.1809 0.3400 1.64e-06 3lmo-a1-m1-cA_3lmo-a1-m2-cA
15 7bvd-a1-m1-cB 495 63 0.2048 0.0343 0.2698 1.7 7bvd-a1-m1-cB_7bvd-a1-m1-cA
16 7bvd-a1-m1-cA 499 63 0.2048 0.0341 0.2698 1.8 7bvd-a1-m1-cB_7bvd-a1-m1-cA
17 1vkh-a2-m2-cB 245 53 0.1566 0.0531 0.2453 2.5 1vkh-a2-m2-cB_1vkh-a2-m1-cA
18 1vkh-a1-m1-cB 245 53 0.1566 0.0531 0.2453 2.5 1vkh-a1-m1-cB_1vkh-a1-m1-cA
19 1vkh-a2-m1-cA 253 53 0.1566 0.0514 0.2453 4.2 1vkh-a2-m2-cB_1vkh-a2-m1-cA
20 1vkh-a1-m1-cA 253 53 0.1566 0.0514 0.2453 4.2 1vkh-a1-m1-cB_1vkh-a1-m1-cA
21 4hwg-a1-m6-cA 371 33 0.1325 0.0296 0.3333 4.9 4hwg-a1-m2-cA_4hwg-a1-m6-cA, 4hwg-a1-m5-cA_4hwg-a1-m6-cA
22 4hwg-a1-m5-cA 371 33 0.1325 0.0296 0.3333 4.9 4hwg-a1-m5-cA_4hwg-a1-m6-cA
23 4hwg-a1-m2-cA 371 33 0.1325 0.0296 0.3333 4.9 4hwg-a1-m2-cA_4hwg-a1-m6-cA
24 4uwm-a1-m1-cA 362 41 0.1446 0.0331 0.2927 4.9 4uwm-a1-m1-cA_4uwm-a1-m1-cB
25 4uwm-a1-m1-cB 362 41 0.1446 0.0331 0.2927 5.1 4uwm-a1-m1-cA_4uwm-a1-m1-cB
26 6n10-a1-m2-cA 403 39 0.1807 0.0372 0.3846 7.0 6n10-a1-m1-cA_6n10-a1-m2-cA
27 6n10-a1-m1-cA 403 39 0.1807 0.0372 0.3846 7.0 6n10-a1-m1-cA_6n10-a1-m2-cA
28 2vnc-a1-m2-cB 666 26 0.1084 0.0135 0.3462 7.4 2vnc-a1-m1-cB_2vnc-a1-m2-cB, 2vnc-a1-m2-cB_2vnc-a1-m1-cA
29 2vnc-a1-m1-cB 666 26 0.1084 0.0135 0.3462 7.4 2vnc-a1-m1-cB_2vnc-a1-m2-cB
30 2vr5-a1-m3-cA 715 26 0.1084 0.0126 0.3462 8.0 2vr5-a1-m3-cB_2vr5-a1-m3-cA
31 2vr5-a1-m2-cA 715 26 0.1084 0.0126 0.3462 8.0 2vr5-a1-m3-cB_2vr5-a1-m2-cA
32 2vr5-a1-m3-cB 714 26 0.1084 0.0126 0.3462 8.1 2vr5-a1-m2-cB_2vr5-a1-m3-cB, 2vr5-a1-m3-cB_2vr5-a1-m2-cA, 2vr5-a1-m3-cB_2vr5-a1-m3-cA
33 2vr5-a1-m2-cB 714 26 0.1084 0.0126 0.3462 8.1 2vr5-a1-m2-cB_2vr5-a1-m3-cB
34 2vnc-a1-m1-cA 699 26 0.1084 0.0129 0.3462 8.4 2vnc-a1-m2-cB_2vnc-a1-m1-cA
35 2hk0-a1-m1-cD 283 42 0.1566 0.0459 0.3095 9.0 2hk0-a1-m1-cA_2hk0-a1-m1-cD, 2hk0-a1-m1-cC_2hk0-a1-m1-cD
36 2hk0-a1-m1-cC 283 42 0.1566 0.0459 0.3095 9.0 2hk0-a1-m1-cA_2hk0-a1-m1-cC, 2hk0-a1-m1-cC_2hk0-a1-m1-cD
37 2hk0-a1-m1-cA 283 42 0.1566 0.0459 0.3095 9.0 2hk0-a1-m1-cA_2hk0-a1-m1-cC, 2hk0-a1-m1-cA_2hk0-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600