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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
GSHMTEQPKTRVSVRIYGQDYTIVGAESPAHIRLVAAFVDDKMHEFSEKQPMLDVPKLAV
LTAVQIASEYLKLKEEYQRLREQLKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2mmv-a1-m1-cB 86 86 1.0000 1.0000 1.0000 1.07e-59 2mmv-a1-m1-cA_2mmv-a1-m1-cB
2 2mmv-a1-m1-cA 86 86 1.0000 1.0000 1.0000 1.07e-59 2mmv-a1-m1-cA_2mmv-a1-m1-cB
3 3zx3-a2-m1-cD 397 18 0.1047 0.0227 0.5000 2.1 3zx3-a2-m1-cC_3zx3-a2-m1-cD
4 3zx3-a2-m1-cC 393 18 0.1047 0.0229 0.5000 2.2 3zx3-a2-m1-cC_3zx3-a2-m1-cD
5 4d6w-a1-m1-cA 407 37 0.1744 0.0369 0.4054 2.8 4d6w-a1-m1-cC_4d6w-a1-m1-cA
6 1vdk-a1-m2-cB 457 25 0.1279 0.0241 0.4400 3.1 1vdk-a1-m1-cB_1vdk-a1-m2-cB, 1vdk-a1-m2-cB_1vdk-a1-m1-cA, 1vdk-a1-m2-cB_1vdk-a1-m2-cA
7 1vdk-a1-m1-cB 457 25 0.1279 0.0241 0.4400 3.1 1vdk-a1-m1-cB_1vdk-a1-m2-cB
8 1vdk-a1-m2-cA 458 25 0.1279 0.0240 0.4400 3.1 1vdk-a1-m2-cB_1vdk-a1-m2-cA
9 1vdk-a1-m1-cA 458 25 0.1279 0.0240 0.4400 3.1 1vdk-a1-m2-cB_1vdk-a1-m1-cA
10 3pm9-a3-m1-cF 459 57 0.1744 0.0327 0.2632 5.1 3pm9-a3-m1-cE_3pm9-a3-m1-cF
11 3pm9-a3-m1-cE 459 57 0.1744 0.0327 0.2632 5.1 3pm9-a3-m1-cE_3pm9-a3-m1-cF
12 3r0o-a1-m1-cC 262 49 0.1744 0.0573 0.3061 5.3 3r0o-a1-m1-cA_3r0o-a1-m1-cC
13 3r0o-a1-m1-cA 262 49 0.1744 0.0573 0.3061 5.3 3r0o-a1-m1-cA_3r0o-a1-m1-cC
14 5zsp-a1-m1-cB 381 44 0.1744 0.0394 0.3409 5.4 5zsp-a1-m1-cB_5zsp-a1-m1-cA
15 6nff-a1-m2-cA 794 20 0.1047 0.0113 0.4500 5.5 6nff-a1-m1-cA_6nff-a1-m2-cA
16 6nff-a1-m1-cA 794 20 0.1047 0.0113 0.4500 5.5 6nff-a1-m1-cA_6nff-a1-m2-cA
17 5zsp-a1-m1-cA 387 44 0.1744 0.0388 0.3409 5.5 5zsp-a1-m1-cB_5zsp-a1-m1-cA
18 6jdc-a1-m2-cA 269 25 0.1279 0.0409 0.4400 9.9 6jdc-a1-m1-cA_6jdc-a1-m2-cA
19 6jdc-a1-m1-cA 269 25 0.1279 0.0409 0.4400 9.9 6jdc-a1-m1-cA_6jdc-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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