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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
GSHMYENEKAMVTETMMKLRNELKALKEDAATFSSLRAMFATRCDEYITQLDEMQRQLAA
AEDEKKTLNSLLRMAIQQKLALTQRLELLEL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ofp-a1-m1-cA 91 91 1.0000 1.0000 1.0000 6.93e-61 6ofp-a1-m1-cA_6ofp-a1-m1-cB
2 6ofp-a1-m1-cB 92 91 1.0000 0.9891 1.0000 8.51e-61 6ofp-a1-m1-cA_6ofp-a1-m1-cB
3 4bl6-a1-m1-cD 81 82 0.6703 0.7531 0.7439 8.37e-36 4bl6-a1-m1-cA_4bl6-a1-m1-cD, 4bl6-a1-m1-cB_4bl6-a1-m1-cD
4 4bl6-a1-m1-cA 78 77 0.6044 0.7051 0.7143 4.65e-33 4bl6-a1-m1-cA_4bl6-a1-m1-cD, 4bl6-a1-m1-cB_4bl6-a1-m1-cA
5 4bl6-a1-m1-cB 73 69 0.5934 0.7397 0.7826 3.92e-32 4bl6-a1-m1-cB_4bl6-a1-m1-cA, 4bl6-a1-m1-cB_4bl6-a1-m1-cD
6 2qa7-a2-m1-cC 102 70 0.2198 0.1961 0.2857 0.24 2qa7-a2-m1-cD_2qa7-a2-m1-cC
7 3i00-a1-m1-cA 76 52 0.1758 0.2105 0.3077 3.0 3i00-a1-m1-cA_3i00-a1-m2-cB
8 3i00-a1-m2-cB 80 52 0.1758 0.2000 0.3077 3.1 3i00-a1-m1-cA_3i00-a1-m2-cB
9 6ijz-a1-m1-cB 683 58 0.1538 0.0205 0.2414 3.5 6ijz-a1-m1-cA_6ijz-a1-m1-cB
10 6ijz-a1-m1-cA 683 58 0.1538 0.0205 0.2414 3.5 6ijz-a1-m1-cA_6ijz-a1-m1-cB
11 6kni-a1-m1-cB 381 38 0.1758 0.0420 0.4211 3.5 6kni-a1-m1-cA_6kni-a1-m1-cB
12 6kni-a1-m1-cA 381 38 0.1758 0.0420 0.4211 3.5 6kni-a1-m1-cA_6kni-a1-m1-cB
13 6paj-a1-m1-cB 203 41 0.1538 0.0690 0.3415 4.6 6paj-a1-m1-cA_6paj-a1-m1-cB
14 6paj-a1-m1-cA 199 41 0.1538 0.0704 0.3415 4.7 6paj-a1-m1-cA_6paj-a1-m1-cB
15 1s3q-a1-m2-cL 154 66 0.2088 0.1234 0.2879 8.9 1s3q-a1-m1-cK_1s3q-a1-m2-cL, 1s3q-a1-m2-cK_1s3q-a1-m2-cL, 1s3q-a1-m2-cL_1s3q-a1-m2-cG
16 1s3q-a1-m2-cK 154 66 0.2088 0.1234 0.2879 8.9 1s3q-a1-m2-cK_1s3q-a1-m2-cJ, 1s3q-a1-m2-cK_1s3q-a1-m2-cL
17 1s3q-a1-m1-cK 154 66 0.2088 0.1234 0.2879 8.9 1s3q-a1-m1-cK_1s3q-a1-m2-cL
18 1s3q-a1-m2-cJ 155 66 0.2088 0.1226 0.2879 9.2 1s3q-a1-m2-cK_1s3q-a1-m2-cJ
19 1s3q-a1-m2-cG 155 66 0.2088 0.1226 0.2879 9.2 1s3q-a1-m2-cL_1s3q-a1-m2-cG

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Reference:
Jacob Schwartz et al.

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