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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=44)
GSHPMCKEHEDEKINIYCLTCEVPTCSMCKVFGIHKACEVAPLQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ddt-a2-m2-cC 44 44 1.0000 1.0000 1.0000 1.45e-27 3ddt-a2-m1-cC_3ddt-a2-m2-cC
2 3ddt-a2-m1-cC 44 44 1.0000 1.0000 1.0000 1.45e-27 3ddt-a2-m1-cC_3ddt-a2-m2-cC
3 3q1d-a1-m2-cA 47 42 0.7727 0.7234 0.8095 5.88e-20 3q1d-a1-m1-cA_3q1d-a1-m2-cA
4 3q1d-a1-m1-cA 47 42 0.7727 0.7234 0.8095 5.88e-20 3q1d-a1-m1-cA_3q1d-a1-m2-cA
5 7xv2-a1-m2-cA 382 37 0.2727 0.0314 0.3243 0.21 7xv2-a1-m1-cA_7xv2-a1-m2-cA
6 7xv2-a1-m1-cA 382 37 0.2727 0.0314 0.3243 0.21 7xv2-a1-m1-cA_7xv2-a1-m2-cA
7 7xt2-a1-m1-cB 388 37 0.2727 0.0309 0.3243 0.33 7xt2-a1-m1-cA_7xt2-a1-m1-cB
8 7xt2-a1-m1-cA 388 37 0.2727 0.0309 0.3243 0.33 7xt2-a1-m1-cA_7xt2-a1-m1-cB
9 7z36-a1-m1-cB 446 26 0.1818 0.0179 0.3077 0.61 7z36-a1-m1-cA_7z36-a1-m1-cB
10 6qaj-a1-m1-cB 441 26 0.1818 0.0181 0.3077 0.62 6qaj-a1-m1-cA_6qaj-a1-m1-cB
11 6qaj-a1-m1-cA 439 26 0.1818 0.0182 0.3077 0.64 6qaj-a1-m1-cA_6qaj-a1-m1-cB
12 7z36-a1-m1-cA 433 26 0.1818 0.0185 0.3077 0.69 7z36-a1-m1-cA_7z36-a1-m1-cB
13 5fwv-a1-m2-cA 294 35 0.3182 0.0476 0.4000 2.0 5fwv-a1-m1-cA_5fwv-a1-m2-cA
14 5fwv-a1-m1-cA 294 35 0.3182 0.0476 0.4000 2.0 5fwv-a1-m1-cA_5fwv-a1-m2-cA
15 7ehe-a1-m1-cB 581 17 0.1818 0.0138 0.4706 9.1 7ehe-a1-m1-cB_7ehe-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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