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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=68)
GSINLRIDDELKARSYAALEKMGVTPSEALRLMLEYIADNERLPFKQTLLSDEDAELVEI
VKERLRNP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4fxe-a1-m2-cA 68 68 1.0000 1.0000 1.0000 8.03e-44 4fxe-a1-m2-cA_4fxe-a1-m2-cB
2 4fxe-a1-m2-cB 78 68 1.0000 0.8718 1.0000 1.01e-43 4fxe-a1-m2-cA_4fxe-a1-m2-cB
3 4fxe-a1-m2-cC 47 37 0.5441 0.7872 1.0000 3.53e-20 4fxe-a1-m1-cC_4fxe-a1-m2-cC
4 4fxe-a1-m1-cC 47 37 0.5441 0.7872 1.0000 3.53e-20 4fxe-a1-m1-cC_4fxe-a1-m2-cC
5 4q2u-a4-m1-cM 82 43 0.2206 0.1829 0.3488 1.0 4q2u-a4-m1-cM_4q2u-a4-m1-cG
6 4q2u-a4-m1-cG 83 43 0.2206 0.1807 0.3488 1.0 4q2u-a4-m1-cM_4q2u-a4-m1-cG
7 8bic-a1-m1-cA 318 26 0.1324 0.0283 0.3462 2.5 8bic-a1-m1-cA_8bic-a1-m1-cB
8 8bic-a1-m1-cB 323 26 0.1324 0.0279 0.3462 3.9 8bic-a1-m1-cA_8bic-a1-m1-cB
9 8df9-a1-m1-cB 845 33 0.2059 0.0166 0.4242 8.0 8df9-a1-m1-cA_8df9-a1-m1-cB
10 8df8-a1-m1-cB 850 33 0.2059 0.0165 0.4242 8.0 8df8-a1-m1-cA_8df8-a1-m1-cB
11 8df8-a1-m1-cA 850 33 0.2059 0.0165 0.4242 8.0 8df8-a1-m1-cA_8df8-a1-m1-cB
12 8df9-a1-m1-cA 781 33 0.2059 0.0179 0.4242 8.2 8df9-a1-m1-cA_8df9-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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