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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
GSKDEVIKEVQEFYKDTYNKLKTKDEPQRETLKAIHYALNCCGLAGGVEQFISDICPKKD
VLETFTVKSCPDAIKEVFD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6rlr-a1-m1-cD 80 79 1.0000 0.9875 1.0000 3.93e-54 6rlr-a1-m1-cA_6rlr-a1-m1-cD
2 6rlr-a1-m1-cA 80 79 1.0000 0.9875 1.0000 3.93e-54 6rlr-a1-m1-cA_6rlr-a1-m1-cD, 6rlr-a1-m1-cB_6rlr-a1-m1-cA
3 6rlr-a1-m1-cB 79 79 1.0000 1.0000 1.0000 4.70e-54 6rlr-a1-m1-cB_6rlr-a1-m1-cA
4 3x0g-a1-m2-cA 93 84 0.2532 0.2151 0.2381 0.004 3x0g-a1-m1-cA_3x0g-a1-m2-cA
5 3x0g-a1-m1-cA 93 84 0.2532 0.2151 0.2381 0.004 3x0g-a1-m1-cA_3x0g-a1-m2-cA
6 5m3d-a2-m1-cC 89 84 0.2405 0.2135 0.2262 0.008 5m3d-a2-m1-cC_5m3d-a2-m1-cB
7 5dfw-a1-m2-cA 90 84 0.2405 0.2111 0.2262 0.009 5dfw-a1-m1-cA_5dfw-a1-m2-cA
8 5dfw-a1-m1-cA 90 84 0.2405 0.2111 0.2262 0.009 5dfw-a1-m1-cA_5dfw-a1-m2-cA
9 5m3d-a2-m1-cB 91 84 0.2405 0.2088 0.2262 0.009 5m3d-a2-m1-cC_5m3d-a2-m1-cB
10 6mux-a1-m1-cV 194 58 0.2152 0.0876 0.2931 0.53 6mux-a1-m1-cH_6mux-a1-m1-cV
11 6mux-a1-m1-cH 194 58 0.2152 0.0876 0.2931 0.53 6mux-a1-m1-cH_6mux-a1-m1-cV
12 7lxu-a1-m1-cV 229 58 0.2152 0.0742 0.2931 0.61 7lxu-a1-m1-cH_7lxu-a1-m1-cV
13 7lxu-a1-m1-cH 229 58 0.2152 0.0742 0.2931 0.61 7lxu-a1-m1-cH_7lxu-a1-m1-cV
14 2vnv-a2-m1-cC 127 55 0.2025 0.1260 0.2909 1.7 2vnv-a2-m1-cC_2vnv-a2-m1-cD
15 2vnv-a2-m1-cD 128 55 0.2025 0.1250 0.2909 1.7 2vnv-a2-m1-cC_2vnv-a2-m1-cD
16 4ce7-a1-m1-cC 342 22 0.1139 0.0263 0.4091 3.0 4ce7-a1-m1-cC_4ce7-a1-m1-cA
17 4ce7-a1-m1-cA 345 22 0.1139 0.0261 0.4091 3.0 4ce7-a1-m1-cC_4ce7-a1-m1-cA
18 7p6f-a3-m3-cDDD 97 37 0.1772 0.1443 0.3784 9.5 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD
19 7p6f-a3-m1-cDDD 97 37 0.1772 0.1443 0.3784 9.5 7p6f-a3-m1-cDDD_7p6f-a3-m3-cDDD

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Reference:
Jacob Schwartz et al.

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