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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=52)
GSKEKPKPTPDYLMQLMNDKKLMSSLPNFSGIFTHLERLLDEEISRVRKDMY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ymj-a1-m1-cB 52 52 1.0000 1.0000 1.0000 2.97e-33 2ymj-a1-m1-cA_2ymj-a1-m1-cB
2 2ymj-a1-m1-cA 52 52 1.0000 1.0000 1.0000 2.97e-33 2ymj-a1-m1-cA_2ymj-a1-m1-cB
3 4dnn-a1-m1-cB 47 42 0.6923 0.7660 0.8571 3.34e-17 4dnn-a1-m1-cA_4dnn-a1-m1-cB
4 4dnn-a1-m1-cA 46 42 0.6923 0.7826 0.8571 3.68e-17 4dnn-a1-m1-cA_4dnn-a1-m1-cB
5 4jvh-a2-m3-cA 168 44 0.5385 0.1667 0.6364 2.61e-07 4jvh-a2-m1-cA_4jvh-a2-m3-cA
6 4jvh-a2-m1-cA 168 44 0.5385 0.1667 0.6364 2.61e-07 4jvh-a2-m1-cA_4jvh-a2-m3-cA
7 4jvh-a1-m2-cA 168 44 0.5385 0.1667 0.6364 2.61e-07 4jvh-a1-m1-cA_4jvh-a1-m2-cA
8 4jvh-a1-m1-cA 168 44 0.5385 0.1667 0.6364 2.61e-07 4jvh-a1-m1-cA_4jvh-a1-m2-cA
9 4jvy-a1-m1-cB 190 46 0.3462 0.0947 0.3913 1.61e-04 4jvy-a1-m1-cB_4jvy-a1-m1-cA
10 4jvy-a1-m1-cA 191 46 0.3462 0.0942 0.3913 1.61e-04 4jvy-a1-m1-cB_4jvy-a1-m1-cA
11 7n7a-a1-m1-cA 269 21 0.1538 0.0297 0.3810 5.8 7n7a-a1-m1-cA_7n7a-a1-m1-cB
12 7n7a-a1-m1-cB 270 21 0.1538 0.0296 0.3810 5.9 7n7a-a1-m1-cA_7n7a-a1-m1-cB
13 4lxu-a1-m1-cA 273 21 0.1538 0.0293 0.3810 6.6 4lxu-a1-m1-cA_4lxu-a1-m1-cB
14 4lxu-a1-m1-cB 274 21 0.1538 0.0292 0.3810 6.6 4lxu-a1-m1-cA_4lxu-a1-m1-cB
15 2ved-a1-m4-cA 252 38 0.2692 0.0556 0.3684 7.1 2ved-a1-m4-cA_2ved-a1-m4-cB
16 2ved-a1-m4-cB 254 38 0.2692 0.0551 0.3684 7.5 2ved-a1-m4-cA_2ved-a1-m4-cB
17 6is5-a1-m1-cC 301 11 0.1731 0.0299 0.8182 9.3 6is5-a1-m1-cC_6is5-a1-m1-cD
18 6is5-a1-m1-cD 303 11 0.1731 0.0297 0.8182 9.3 6is5-a1-m1-cC_6is5-a1-m1-cD, 6is5-a1-m1-cD_6is5-a1-m1-cB
19 6is5-a1-m1-cB 304 11 0.1731 0.0296 0.8182 9.3 6is5-a1-m1-cD_6is5-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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