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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
GSLDLHGLHVDEALEHLMRVLEKKTEEFKQNGGKPYLSVITGRGGGVARIKPAVIKYLIS
HSFRFSEIKPGCLKVML

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3fau-a3-m1-cC 77 77 1.0000 1.0000 1.0000 5.11e-52 3fau-a3-m1-cC_3fau-a3-m1-cB
2 3fau-a1-m1-cC 77 77 1.0000 1.0000 1.0000 5.11e-52 3fau-a1-m1-cC_3fau-a1-m1-cD
3 3fau-a1-m1-cD 79 78 0.9870 0.9620 0.9744 1.79e-49 3fau-a1-m1-cC_3fau-a1-m1-cD, 3fau-a1-m1-cD_3fau-a1-m1-cB
4 3fau-a3-m1-cB 81 80 0.9870 0.9383 0.9500 3.70e-49 3fau-a3-m1-cC_3fau-a3-m1-cB
5 3fau-a1-m1-cB 81 80 0.9870 0.9383 0.9500 3.70e-49 3fau-a1-m1-cD_3fau-a1-m1-cB
6 7bra-a1-m1-cB 445 58 0.1948 0.0337 0.2586 0.089 7bra-a1-m1-cA_7bra-a1-m1-cB
7 7bra-a1-m1-cA 445 58 0.1948 0.0337 0.2586 0.089 7bra-a1-m1-cA_7bra-a1-m1-cB
8 7zkk-a1-m4-cA 669 28 0.1429 0.0164 0.3929 2.3 7zkk-a1-m1-cA_7zkk-a1-m4-cA
9 7zkk-a1-m1-cA 669 28 0.1429 0.0164 0.3929 2.3 7zkk-a1-m1-cA_7zkk-a1-m4-cA
10 1nx8-a1-m2-cA 248 24 0.1429 0.0444 0.4583 5.8 1nx8-a1-m2-cA_1nx8-a1-m1-cB
11 2yy8-a1-m1-cA 174 26 0.1688 0.0747 0.5000 6.3 2yy8-a1-m1-cA_2yy8-a1-m1-cB
12 1nx8-a1-m1-cB 256 24 0.1429 0.0430 0.4583 6.3 1nx8-a1-m2-cA_1nx8-a1-m1-cB
13 2yy8-a1-m1-cB 174 26 0.1688 0.0747 0.5000 6.4 2yy8-a1-m1-cA_2yy8-a1-m1-cB
14 2pfm-a1-m2-cB 434 58 0.2078 0.0369 0.2759 9.1 2pfm-a1-m1-cA_2pfm-a1-m2-cB, 2pfm-a1-m1-cB_2pfm-a1-m2-cB, 2pfm-a1-m2-cA_2pfm-a1-m2-cB
15 2pfm-a1-m2-cA 434 58 0.2078 0.0369 0.2759 9.1 2pfm-a1-m2-cA_2pfm-a1-m2-cB
16 2pfm-a1-m1-cB 434 58 0.2078 0.0369 0.2759 9.1 2pfm-a1-m1-cB_2pfm-a1-m2-cB
17 2pfm-a1-m1-cA 434 58 0.2078 0.0369 0.2759 9.1 2pfm-a1-m1-cA_2pfm-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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