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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
GSLILTRRVGETLIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHREEIYQRIQAEK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2bti-a1-m1-cB 55 55 1.0000 1.0000 1.0000 2.86e-33 2bti-a1-m1-cB_2bti-a1-m1-cA
2 2bti-a1-m1-cA 56 54 0.9818 0.9643 1.0000 1.39e-32 2bti-a1-m1-cB_2bti-a1-m1-cA
3 1y00-a1-m1-cB 61 54 0.9636 0.8689 0.9815 2.65e-30 1y00-a1-m1-cA_1y00-a1-m1-cB
4 1y00-a1-m1-cA 61 54 0.9636 0.8689 0.9815 2.65e-30 1y00-a1-m1-cA_1y00-a1-m1-cB
5 7yr6-a1-m1-cE 55 54 0.8909 0.8909 0.9074 4.34e-28 7yr6-a1-m1-cD_7yr6-a1-m1-cE
6 7yr6-a1-m1-cD 55 54 0.8909 0.8909 0.9074 4.34e-28 7yr6-a1-m1-cD_7yr6-a1-m1-cE
7 2mf0-a1-m1-cB 59 52 0.7091 0.6610 0.7500 1.58e-23 2mf0-a1-m1-cA_2mf0-a1-m1-cB
8 2mf0-a1-m1-cA 59 52 0.7091 0.6610 0.7500 1.58e-23 2mf0-a1-m1-cA_2mf0-a1-m1-cB
9 4krw-a1-m2-cA 67 64 0.3818 0.3134 0.3281 0.028 4krw-a1-m1-cA_4krw-a1-m2-cA
10 4krw-a1-m1-cA 67 64 0.3818 0.3134 0.3281 0.028 4krw-a1-m1-cA_4krw-a1-m2-cA
11 8fia-a1-m2-cA 1772 20 0.2000 0.0062 0.5500 3.1 8fia-a1-m1-cA_8fia-a1-m2-cA
12 8fia-a1-m1-cA 1772 20 0.2000 0.0062 0.5500 3.1 8fia-a1-m1-cA_8fia-a1-m2-cA
13 4j16-a1-m1-cB 369 17 0.1455 0.0217 0.4706 7.2 4j16-a1-m1-cB_4j16-a1-m1-cA
14 4j16-a1-m1-cA 372 17 0.1455 0.0215 0.4706 7.2 4j16-a1-m1-cB_4j16-a1-m1-cA
15 6vlk-a2-m5-cB 583 50 0.2727 0.0257 0.3000 7.6 6vlk-a2-m3-cB_6vlk-a2-m5-cB
16 6vlk-a2-m3-cB 583 50 0.2727 0.0257 0.3000 7.6 6vlk-a2-m3-cB_6vlk-a2-m5-cB

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Reference:
Jacob Schwartz et al.

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